RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NCKAP1Q9Y2A7 1128 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 NYNRINQ9P2P1 1898 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 FER1L5A0AVI2 2057 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 NSD1Q96L73 2696 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 A0A1W2PQ27 194 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 A0A1W2PQ64 194 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 A0A1W2PQC6 194 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 ARHGAP10A1A4S6 786 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 HEATR9A2RTY3 570 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 EME2A4GXA9 379 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 LRRC72A6NJI9 287 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 TMX2-CTNND1H3BSU7 103 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 TULP1O00294 542 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 FFAR2O15552 330 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 COCHO43405 550 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 TIMM44O43615 452 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 GREM1O60565 184 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 C4BPAP04003 597 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 C8BP07358 591 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 SPATA31C1P0DKV0 1188 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 ZNF177Q13360 481 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 NPY5RQ15761 445 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 KYAT1Q16773 422 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 EIF2S3LQ2VIR3 472 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 NAPEPLDQ6IQ20 393 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 GALNT17Q6IS24 598 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 FAM171BQ6P995 826 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 RAB11FIP2Q7L804 512 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 CCDC83Q8IWF9 413 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 TTC13Q8NBP0 860 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 OR2T34Q8NGX1 318 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 PDCD6IPQ8WUM4 868 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 GOLGA1Q92805 767 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 LURAP1Q96LR2 239 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 SLITRK1Q96PX8 696 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 EPAS1Q99814 870 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 TUFT1Q9NNX1 390 aa6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 DDX43Q9NXZ2 648 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 RBM19Q9Y4C8 960 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-217ENST00000569429 FBN1P35555 2871 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 KLF18A0A0U1RQI7 1052 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 NEMP2A6NFY4 417 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 CCDC169A6NNP5 214 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 KPNA7A9QM74 516 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 K7ESM1 405 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 SCAMP1O15126 338 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 CLDN3O15551 220 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 LATO43561 262 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 CCNT1O60563 726 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PIAS2O75928 621 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ACAT1P24752 427 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ANXA13P27216 316 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 NPTX2P47972 431 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 TUBP50607 506 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PEX3P56589 373 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 EXOSC10Q01780 885 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ENOX2Q16206 610 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 NTRK3Q16288 839 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 CCDC142Q17RM4 750 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 HECTD3Q5T447 861 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 SNX30Q5VWJ9 437 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 JADE1Q6IE81 842 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ZPBP2Q6X784 338 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 C4orf50Q6ZRC1 276 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 EFL1Q7Z2Z2 1120 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ANKS1BQ7Z6G8 1248 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 DSG4Q86SJ6 1040 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ZFAND4Q86XD8 727 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 CATSPER3Q86XQ3 398 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 TMEM86AQ8N2M4 240 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PDCL2Q8N4E4 241 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 OVCA2Q8WZ82 227 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 RNF25Q96BH1 459 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PIWIL1Q96J94 861 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 HAPLN2Q9GZV7 340 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PABPC3Q9H361 631 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 ZSWIM6Q9HCJ5 1215 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 POLD4Q9HCU8 107 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 KLHL11Q9NVR0 708 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 FBXL12Q9NXK8 326 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 NCKIPSDQ9NZQ3 722 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 MAGEC2Q9UBF1 373 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PPM1HQ9ULR3 514 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 TP53TG5Q9Y2B4 290 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 DERAQ9Y315 318 aa6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PRRC2AP48634 2157 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-217ENST00000569429 PRAMEF33A0A0G2JMD5 474 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 ARHGEF35A5YM69 484 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 TTLL8A6PVC2 850 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 EFCAB7A8K855 629 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 NTN3O00634 580 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 GABRDO14764 452 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 SGSM2O43147 1006 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 FAM189A1O60320 539 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 PRAMEF10O60809 474 aa6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 LUC7L3O95232 432 aaKnown RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 PENKP01210 267 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-217ENST00000569429 SSRP1Q08945 709 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms