RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CHRDQ9H2X0 955 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 ZNHIT6Q9NWK9 470 aaKnown RBP13.31□□□□□ -0.28
CDT1-203ENST00000569140 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 STIM2Q9P246 746 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 BZW2Q9Y6E2 419 aaKnown RBP13.31□□□□□ -0.28
CDT1-203ENST00000569140 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 TBC1D3BA6NDS4 549 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 TBL1XO60907 577 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 TULP3O75386 442 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 KAT7O95251 611 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 LATS1O95835 1130 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 PLEKP08567 350 aaPredicted RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 SLC2A3P11169 496 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 KRT3P12035 628 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 TFE3P19532 575 aaPredicted RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 SDC4P31431 198 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 EIF2DP41214 584 aaKnown RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 RPS9P46781 194 aaKnown RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 MTAPQ13126 283 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 CCINQ13939 588 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 ANGPT1Q15389 498 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 PREPLQ4J6C6 727 aaPredicted RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 MPPE1Q53F39 396 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 RAP1GAP2Q684P5 730 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 PPP1R2P3Q6NXS1 205 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 DCUN1D2Q6PH85 259 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 NUDT18Q6ZVK8 323 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 MON1BQ7L1V2 547 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 C1orf210Q8IVY1 113 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 CCDC117Q8IWD4 279 aaPredicted RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 PRSS33Q8NF86 280 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 RPLP0P6Q8NHW5 317 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 JOSD2Q8TAC2 188 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 CLDN23Q96B33 292 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 TMA16Q96EY4 203 aaKnown RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 BTN2A3PQ96KV6 586 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDT1-203ENST00000569140 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
CDT1-203ENST00000569140 XPO7Q9UIA9 1087 aaKnown RBP13.3□□□□□ -0.28
CDT1-203ENST00000569140 F5H5T6 163 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 H0Y858 1186 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDT1-203ENST00000569140 TRIM24O15164 1050 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 AP5Z1O43299 807 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 CACNG3O60359 315 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 IGLV3-25P01717 112 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 PDGFRAP16234 1089 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 DESP17661 470 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 RRM1P23921 792 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SLC6A4P31645 630 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 TIE1P35590 1138 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 GRIA2P42262 883 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SGSHP51688 502 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 PTP4A2Q12974 167 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 FZD5Q13467 585 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SLC25A52Q3SY17 297 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 FBXO43Q4G163 708 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 C2orf27AQ580R0 203 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 FYB2Q5VWT5 728 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 NADSYN1Q6IA69 706 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SFTPA1Q8IWL2 248 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 ETFBKMTQ8IXQ9 262 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 MCOLN2Q8IZK6 566 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 ZNF687Q8N1G0 1237 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SYNPOQ8N3V7 929 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 RXFP2Q8WXD0 754 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SYN2Q92777 582 aaPredicted RBP13.29□□□□□ -0.28
CDT1-203ENST00000569140 ZNF653Q96CK0 615 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 MCEEQ96PE7 176 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 NPY6RQ99463 290 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 SYT11Q9BT88 431 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 WDCPQ9H6R7 721 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 PIGVQ9NUD9 493 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 ADAMTS1Q9UHI8 967 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 TMEM59LQ9UK28 342 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 PAXBP1Q9Y5B6 917 aa13.29□□□□□ -0.28
CDT1-203ENST00000569140 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 MFAP3LO75121 409 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 F9P00740 461 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 PENKP01210 267 aaPredicted RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 FTLP02792 175 aaPredicted RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 TACR2P21452 398 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 GPD1P21695 349 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 RDXP35241 583 aaKnown RBP13.28□□□□□ -0.28
CDT1-203ENST00000569140 GGCXP38435 758 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 CCR3P51677 355 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 ZNF75DP51815 510 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 NUBP1P53384 320 aa13.28□□□□□ -0.28
CDT1-203ENST00000569140 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms