RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LETM1O95202 739 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 C7P10643 843 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 HLA-FP30511 346 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 SLC6A4P31645 630 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 GBP1P32455 592 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 ANP32AP39687 249 aaKnown RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 IL12RB1P42701 662 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 PTGER3P43115 390 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 HARS2P49590 506 aaKnown RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 ZNF445P59923 1031 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 PITX1P78337 314 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 EIF4HQ15056 248 aaKnown RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 ELF2Q15723 593 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 ADGRF1Q5T601 910 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 PEAR1Q5VY43 1037 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 ANKS1BQ7Z6G8 1248 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 KIAA0907Q7Z7F0 614 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 TMEM110Q86TL2 294 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 TAC4Q86UU9 113 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 SCUBE3Q8IX30 993 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 CHPFQ8IZ52 775 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 IPO4Q8TEX9 1081 aaKnown RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 RNF139Q8WU17 664 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 LMLNQ96KR4 655 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 MRGPRX1Q96LB2 322 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 CPXM1Q96SM3 734 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 RTKNQ9BST9 563 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 SLC2A11Q9BYW1 496 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 MIS12Q9H081 205 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 SLC6A17Q9H1V8 727 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 NDST4Q9H3R1 872 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 VPS45Q9NRW7 570 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 THAP10Q9P2Z0 257 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 NAALADL1Q9UQQ1 740 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 STON1Q9Y6Q2 735 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 WDFY3Q8IZQ1 3526 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 ASPMQ8IZT6 3477 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 CNOT1A5YKK6 2376 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 IGHV1OR15-9A0A0B4J2B8 117 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 PATE3B3GLJ2 98 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 IRAK2O43187 625 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SART1O43290 800 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 THAP12O43422 761 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 MED7O43513 233 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 RHOBTB1O94844 696 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 CYBBP04839 570 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 NCAM1P13591 858 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SDHBP21912 280 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 PRKCHP24723 683 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 CLCN1P35523 988 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 ACADSBP45954 432 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 MTIF2P46199 727 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 COPAP53621 1224 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 TBX4P57082 545 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 CREB5Q02930 508 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 ZNF234Q14588 700 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 TAF5Q15542 800 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 PTPRNQ16849 979 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 ARHGAP44Q17R89 818 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 FUT11Q495W5 492 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 VWA3BQ502W6 1294 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 MPPE1Q53F39 396 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 HSP90AA4PQ58FG1 418 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 MPP7Q5T2T1 576 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 PIK3R6Q5UE93 754 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 OTUD1Q5VV17 481 aaPredicted RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 CDKAL1Q5VV42 579 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SYPL2Q5VXT5 272 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 NUGGCQ68CJ6 796 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 RFWD3Q6PCD5 774 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 OLFML1Q6UWY5 402 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 ADIPOR2Q86V24 386 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 PASD1Q8IV76 773 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 FAM71AQ8IYT1 594 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 ADAM32Q8TC27 787 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 DDI1Q8WTU0 396 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SORCS1Q8WY21 1168 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 AZIN2Q96A70 460 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 ERLEC1Q96DZ1 483 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SPACA7Q96KW9 195 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 FAM81BQ96LP2 452 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SERPINB11Q96P15 392 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 TUBGCP2Q9BSJ2 902 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 NAA15Q9BXJ9 866 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 MKRN2Q9H000 416 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 NUCKS1Q9H1E3 243 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 SAMSN1Q9NSI8 373 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 ELOVL2Q9NXB9 296 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 USP36Q9P275 1121 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 BCCIPQ9P287 314 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDH3-209ENST00000569080 XPO7Q9UIA9 1087 aaKnown RBP8.14□□□□□ -1.11
CDH3-209ENST00000569080 DNAJC12Q9UKB3 198 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 TLR6Q9Y2C9 796 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 FHOD1Q9Y613 1164 aa8.14□□□□□ -1.11
CDH3-209ENST00000569080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms