RNA–Protein interactions for RNA: ENST00000569042.5

PDPR-211, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 4

Gene PDPR, Length 598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-211	ENST00000569042	GLUD2	P49448	558 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	ARPP19	P56211	112 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	BASP1	P80723	227 aa	Known RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	PLD1	Q13393	1074 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	STAT4	Q14765	748 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	PAFAH1B3	Q15102	231 aa	Known RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	TAF12	Q16514	161 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	GLIPR1L2	Q4G1C9	344 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	DNAJC21	Q5F1R6	531 aa	Known RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	KCNT2	Q6UVM3	1135 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	LRRC31	Q6UY01	552 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	HFE2	Q6ZVN8	426 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	TAOK1	Q7L7X3	1001 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	TAC4	Q86UU9	113 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	LRRC49	Q8IUZ0	686 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	RIBC1	Q8N443	379 aa	Predicted RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	PQLC3	Q8N755	202 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	FAM71D	Q8N9W8	422 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	STKLD1	Q8NE28	680 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	FBXO22	Q8NEZ5	403 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	RIN2	Q8WYP3	895 aa	Predicted RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	EDEM1	Q92611	657 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	EXOC4	Q96A65	974 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	ATP6V1G3	Q96LB4	118 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.22	□□□□□ -0.61	4e-6	■■□□□ 12.3
PDPR-211	ENST00000569042	YME1L1	Q96TA2	773 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	VAT1	Q99536	393 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	SEPT5	Q99719	369 aa	Predicted RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	RHOBTB2	Q9BYZ6	727 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	TKTL2	Q9H0I9	626 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	WDR6	Q9NNW5	1121 aa	Known RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	AFF4	Q9UHB7	1163 aa	Known RBP	11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	TLR6	Q9Y2C9	796 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	PCDHB12	Q9Y5F1	795 aa		11.22	□□□□□ -0.61
PDPR-211	ENST00000569042	COL4A4	P53420	1690 aa	Predicted RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042		A0A087WUV0	522 aa	Predicted RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	FAM92A	A1XBS5	289 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	C5orf60	A6NFR6	353 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042		F8W810	466 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042		H3BQF6	201 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	AP3B1	O00203	1094 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	RIPK2	O43353	540 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	GCAT	O75600	419 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	SYF2	O95926	243 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	IGLV3-25	P01717	112 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	FYN	P06241	537 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	OR4Q2	P0C623	313 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	CSH1	P0DML2	217 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	CSH2	P0DML3	217 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	TFE3	P19532	575 aa	Predicted RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	IL4R	P24394	825 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	ELF1	P32519	619 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	RPL22	P35268	128 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	LMAN1	P49257	510 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	NRG1	Q02297	640 aa	Predicted RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	NR1H3	Q13133	447 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	DPYS	Q14117	519 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	CA9	Q16790	459 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	OTUD1	Q5VV17	481 aa	Predicted RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	NCBP2-AS2	Q69YL0	99 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	ITPRIPL1	Q6GPH6	555 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	BHLHA9	Q7RTU4	235 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	ATP11C	Q8NB49	1132 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	DIS3L	Q8TF46	1054 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	NDRG1	Q92597	394 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	LRRC39	Q96DD0	335 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	TBC1D31	Q96DN5	1066 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	PGM2	Q96G03	612 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	CENPH	Q9H3R5	247 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	RETREG1	Q9H6L5	497 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	XAB2	Q9HCS7	855 aa	Known RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	IL23A	Q9NPF7	189 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	TMEM30A	Q9NV96	361 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	MTMR10	Q9NXD2	777 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	ARHGEF38	Q9NXL2	777 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	IL37	Q9NZH6	218 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	UXT	Q9UBK9	157 aa	Predicted RBP	11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	OR12D3	Q9UGF7	316 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	CDY1	Q9Y6F8	540 aa		11.21	□□□□□ -0.61
PDPR-211	ENST00000569042	TET1	Q8NFU7	2136 aa		11.21	□□□□□ -0.62
PDPR-211	ENST00000569042	VWA8	A3KMH1	1905 aa		11.21	□□□□□ -0.62
PDPR-211	ENST00000569042		A0A1W2PQH9	124 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	AGPS	O00116	658 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	RASGRF2	O14827	1237 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	RGS16	O15492	202 aa	Predicted RBP	11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	TBC1D4	O60343	1298 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	AGT	P01019	485 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	AMPD1	P23109	780 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	EPHB2	P29323	1055 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	MAGEA4	P43358	317 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	ALDH1A3	P47895	512 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	GATM	P50440	423 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	ATXN1	P54253	815 aa	Known RBP	11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	TBX4	P57082	545 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	WDR5	P61964	334 aa	Known RBP	11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	DSG1	Q02413	1049 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	RING1	Q06587	406 aa		11.2	□□□□□ -0.62
PDPR-211	ENST00000569042	ZNF844	Q08AG5	666 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms