RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 MAGEA11P43364 429 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 CXADRP78310 365 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 CCZ1BP86790 482 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 CCZ1P86791 482 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 GAD2Q05329 585 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 LY6DQ14210 128 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 ARID5BQ14865 1188 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 LAYNQ6UX15 382 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 LRRC69Q6ZNQ3 347 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 TRMT11Q7Z4G4 463 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 ERICH1Q86X53 443 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 BBS7Q8IWZ6 715 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 CD302Q8IX05 232 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 TTC9Q92623 222 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 SPATA17Q96L03 361 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 EIF2B4Q9UI10 523 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS9D1-207ENST00000568691 MEI4A8MW99 385 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 AKR1B15C9JRZ8 316 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 PES1O00541 588 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 GREM1O60565 184 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 GYPCP04921 128 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 GARTP22102 1010 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 GRIK1P39086 918 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 LIG4P49917 911 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 CACNA2D1P54289 1103 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 KCNA1Q09470 495 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 TARDBPQ13148 414 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 KYAT1Q16773 422 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 FUT11Q495W5 492 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 KIAA1324Q6UXG2 1013 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 FAM186BQ8IYM0 893 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 CHPFQ8IZ52 775 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 TC2NQ8N9U0 490 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 CADM4Q8NFZ8 388 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 BICD1Q96G01 975 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 WBP1Q96G27 269 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 FUBP3Q96I24 572 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 TTYH3Q9C0H2 523 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 ASB7Q9H672 318 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 CRTAC1Q9NQ79 661 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 ITM2CQ9NQX7 267 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 NME7Q9Y5B8 376 aa12.55□□□□□ -0.4
VPS9D1-207ENST00000568691 E2F8A0AVK6 867 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 H0Y8X5 98 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 PCDHGA12O60330 932 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 STX10O60499 249 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 CISD3P0C7P0 127 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 LMO2P25791 158 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 SV2CQ496J9 727 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 IL27RAQ6UWB1 636 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 LIMS2Q7Z4I7 341 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 SPATA2LQ8IUW3 424 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 C1orf127Q8N9H9 656 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 XXYLT1Q8NBI6 393 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 ZSWIM2Q8NEG5 633 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 KIAA1524Q8TCG1 905 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 MYLPFQ96A32 169 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 NRSN2Q9GZP1 204 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 SPHK2Q9NRA0 654 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 TMEM131Q92545 1883 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
VPS9D1-207ENST00000568691 FLNCQ14315 2725 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 NUMA1Q14980 2115 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 CAPN8A6NHC0 703 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 PMM2O15305 246 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 CCP110O43303 1012 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 COCHO43405 550 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 BRINP1O60477 761 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 IGLV3-19P01714 112 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 SKILP12757 684 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 C6P13671 934 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 TRIM21P19474 475 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 BDNFP23560 247 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 GRK6P43250 576 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 PDE6CP51160 858 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 TPMTP51580 245 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 IL9RQ01113 521 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 TAF10Q12962 218 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 DNAJC3Q13217 504 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 SYCP1Q15431 976 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 SOWAHAQ2M3V2 549 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-207ENST00000568691 COLEC12Q5KU26 742 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms