RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 TOE1Q96GM8 510 aaKnown RBP15.76■□□□□ 0.11
COMMD4-223ENST00000568301 RAB20Q9NX57 234 aa15.76■□□□□ 0.11
COMMD4-223ENST00000568301 ELOVL2Q9NXB9 296 aa15.76■□□□□ 0.11
COMMD4-223ENST00000568301 KNL1Q8NG31 2342 aa15.76■□□□□ 0.11
COMMD4-223ENST00000568301 A0A1B0GTW7 788 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 A0A1W2PQ27 194 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 A0A1W2PQ64 194 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 SYNCRIPO60506 623 aaKnown RBP15.75■□□□□ 0.11
COMMD4-223ENST00000568301 IGLV3-19P01714 112 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 HMBSP08397 361 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 MXI1P50539 228 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 TPMTP51580 245 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 TKTL1P51854 596 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 YWHAGP61981 247 aaKnown RBP eCLIP15.75■□□□□ 0.11
COMMD4-223ENST00000568301 GRIK2Q13002 908 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 COL28A1Q2UY09 1125 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 SOWAHCQ53LP3 525 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-223ENST00000568301 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 SLCO6A1Q86UG4 719 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 RBBP8NLQ8NC74 664 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-223ENST00000568301 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 PLD4Q96BZ4 506 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 GPR174Q9BXC1 333 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 PTPRBP23467 1997 aa15.75■□□□□ 0.11
COMMD4-223ENST00000568301 ACACAQ13085 2346 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 SLC12A8A0AV02 714 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 METTL12A8MUP2 240 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 KCNJ18B7U540 433 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 CBFA2T3O75081 653 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 ZBED1O96006 694 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 NCAM1P13591 858 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 ZNF234Q14588 700 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 TRIP4Q15650 581 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-223ENST00000568301 PDZD3Q86UT5 571 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 MDM1Q8TC05 714 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 DDI1Q8WTU0 396 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 PRCCQ92733 491 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-223ENST00000568301 SIPA1Q96FS4 1042 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 NUP58Q9BVL2 599 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 SCAND2PQ9GZW5 306 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-223ENST00000568301 CCDC86Q9H6F5 360 aaKnown RBP15.74■□□□□ 0.11
COMMD4-223ENST00000568301 OLA1Q9NTK5 396 aaKnown RBP15.74■□□□□ 0.11
COMMD4-223ENST00000568301 CLEC4EQ9ULY5 219 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 ZDHHC9Q9Y397 364 aa15.74■□□□□ 0.11
COMMD4-223ENST00000568301 APC2O95996 2303 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 MEI4A8MW99 385 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 CETN3O15182 167 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 ZNF202O95125 648 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 C7P10643 843 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 EPB41P11171 864 aaKnown RBP15.73■□□□□ 0.11
COMMD4-223ENST00000568301 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
COMMD4-223ENST00000568301 ZNF445P59923 1031 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 PDE4CQ08493 712 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 MPPE1Q53F39 396 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 TATDN2Q93075 761 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 CCDC34Q96HJ3 373 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 ARID3AQ99856 593 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 PCED1AQ9H1Q7 454 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 IL21RQ9HBE5 538 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 STOML2Q9UJZ1 356 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 PCOLCE2Q9UKZ9 415 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 COQ4Q9Y3A0 265 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
COMMD4-223ENST00000568301 CABIN1Q9Y6J0 2220 aa15.73■□□□□ 0.11
COMMD4-223ENST00000568301 XPO1O14980 1071 aaKnown RBP15.72■□□□□ 0.11
COMMD4-223ENST00000568301 BCAT2O15382 392 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-223ENST00000568301 ZNF883P0CG24 379 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 ACADMP11310 421 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 COPAP53621 1224 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 BCAT1P54687 386 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 CAMK2GQ13555 558 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-223ENST00000568301 TMEM215Q68D42 235 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 SERPINA13PQ6UXR4 307 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 BHLHA9Q7RTU4 235 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 GLRX5Q86SX6 157 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 ZCCHC9Q8N567 271 aaKnown RBP15.72■□□□□ 0.11
COMMD4-223ENST00000568301 HNRNPLLQ8WVV9 542 aaKnown RBP15.72■□□□□ 0.11
COMMD4-223ENST00000568301 EEF2KMTQ96G04 330 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 ULBP1Q9BZM6 244 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 CIPCQ9C0C6 399 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 MIR1-1HGQ9H1L0 117 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 LRRC4Q9HBW1 653 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 APOBEC2Q9Y235 224 aaKnown RBP15.72■□□□□ 0.11
COMMD4-223ENST00000568301 ATP6V1DQ9Y5K8 247 aa15.72■□□□□ 0.11
COMMD4-223ENST00000568301 SETXQ7Z333 2677 aaKnown RBP15.71■□□□□ 0.11
COMMD4-223ENST00000568301 EPHX1P07099 455 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 PRKCHP24723 683 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 HOXD9P28356 352 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-223ENST00000568301 BNC1Q01954 994 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 ARID5AQ03989 594 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 CUL2Q13617 745 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 SGO2Q562F6 1265 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 ADGRF1Q5T601 910 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 DCAF12L1Q5VU92 463 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 BSPRYQ5W0U4 402 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 IL27RAQ6UWB1 636 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 FMNL3Q8IVF7 1028 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 OR2T3Q8NH03 318 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 C1orf216Q8TAB5 229 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 SETD7Q8WTS6 366 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms