RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 A0A1W2PQF6 199 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 PRRT4C9JH25 899 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 ZBTB24O43167 697 aaPredicted RBP13.46□□□□□ -0.25
TSC2-220ENST00000568238 MAP3K13O43283 966 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 CISD3P0C7P0 127 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 KRT5P13647 590 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 GABRG2P18507 467 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 WASP42768 502 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 MFAP3P55082 362 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 ARHGAP44Q17R89 818 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 MAP7D1Q3KQU3 841 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 DENND1CQ8IV53 801 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 RNF139Q8WU17 664 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 KCTD13Q8WZ19 329 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 NDRG1Q92597 394 aaKnown RBP13.46□□□□□ -0.25
TSC2-220ENST00000568238 P2RY11Q96G91 374 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 ACOX2Q99424 681 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 GABRG3Q99928 467 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 RBSNQ9H1K0 784 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 CNGB3Q9NQW8 809 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 FAM207AQ9NSI2 230 aaPredicted RBP13.46□□□□□ -0.25
TSC2-220ENST00000568238 CALCOCO1Q9P1Z2 691 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
TSC2-220ENST00000568238 SIK3Q9Y2K2 1263 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.25
TSC2-220ENST00000568238 LNP1A1A4G5 178 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 YJEFN3A6XGL0 299 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 E7ENQ6 273 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 M0QYV0 167 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 CYBBP04839 570 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 LCP1P13796 627 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 HARS2P49590 506 aaKnown RBP13.45□□□□□ -0.26
TSC2-220ENST00000568238 UBASH3AP57075 661 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 STILQ15468 1287 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 KLHDC7AQ5VTJ3 777 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 BSPRYQ5W0U4 402 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 DPY19L2P1Q6NXN4 242 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 ARMCX6Q7L4S7 300 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 ANKS1BQ7Z6G8 1248 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 CPXM2Q8N436 756 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
TSC2-220ENST00000568238 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
TSC2-220ENST00000568238 TFAP2BQ92481 460 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 CACNA2D2Q9NY47 1150 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 IFNKQ9P0W0 207 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 MBD1Q9UIS9 605 aaPredicted RBP13.45□□□□□ -0.26
TSC2-220ENST00000568238 FBXO10Q9UK96 956 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 SLC27A6Q9Y2P4 619 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
TSC2-220ENST00000568238 FRYQ5TBA9 3013 aa13.45□□□□□ -0.26
TSC2-220ENST00000568238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 GFRA2O00451 464 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 KHNYNO15037 678 aaKnown RBP13.44□□□□□ -0.26
TSC2-220ENST00000568238 EPHB6O15197 1021 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 CALCAP01258 141 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 ADRB1P08588 477 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 PNMA6AP0CW24 399 aaPredicted RBP13.44□□□□□ -0.26
TSC2-220ENST00000568238 UCHL3P15374 230 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 NDUFV2P19404 249 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 BRD2P25440 801 aaKnown RBP13.44□□□□□ -0.26
TSC2-220ENST00000568238 USP8P40818 1118 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 PTGER3P43115 390 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 RGS7P49802 495 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 ZNF132P52740 706 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 DAOAP59103 153 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 TRIP4Q15650 581 aaPredicted RBP13.44□□□□□ -0.26
TSC2-220ENST00000568238 SPDYCQ5MJ68 293 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 LYSMD4Q5XG99 296 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 KIAA1211LQ6NV74 962 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 ENOSF1Q7L5Y1 443 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 FAM217AQ8IXS0 508 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 TMEFF1Q8IYR6 380 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 SCML4Q8N228 414 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 FRMD1Q8N878 549 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 DDI1Q8WTU0 396 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 EDEM1Q92611 657 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 PIGKQ92643 395 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 FAM81BQ96LP2 452 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 GANQ9H2C0 597 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 CD248Q9HCU0 757 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 ABCC13Q9NSE7 274 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 SFMBT1Q9UHJ3 866 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
TSC2-220ENST00000568238 MUC22E2RYF6 1773 aaPredicted RBP13.43□□□□□ -0.26
TSC2-220ENST00000568238 PATE3B3GLJ2 98 aa13.43□□□□□ -0.26
TSC2-220ENST00000568238 RNF225M0QZC1 329 aaPredicted RBP13.43□□□□□ -0.26
TSC2-220ENST00000568238 NPC1O15118 1278 aa13.43□□□□□ -0.26
TSC2-220ENST00000568238 AP5Z1O43299 807 aa13.43□□□□□ -0.26
TSC2-220ENST00000568238 MSI1O43347 362 aaKnown RBP13.43□□□□□ -0.26
TSC2-220ENST00000568238 ZNF217O75362 1048 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms