RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 BUB1BO60566 1050 aaPredicted RBP16.31■□□□□ 0.2
SPG7-218ENST00000568205 SLC34A2O95436 690 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 LATS1O95835 1130 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 MOCS2O96007 188 aaPredicted RBP16.31■□□□□ 0.2
SPG7-218ENST00000568205 PSMC3P17980 439 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 MIPP30301 263 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 PCK1P35558 622 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 NAP1L1P55209 391 aaKnown RBP16.31■□□□□ 0.2
SPG7-218ENST00000568205 GRM2Q14416 872 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
SPG7-218ENST00000568205 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 SCYL2Q6P3W7 929 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 BBS7Q8IWZ6 715 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 YAF2Q8IY57 180 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 ATP6V0D2Q8N8Y2 350 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 TPCN2Q8NHX9 752 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 AZIN2Q96A70 460 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 BTN2A3PQ96KV6 586 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 TBC1D14Q9P2M4 693 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 SLC12A6Q9UHW9 1150 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
SPG7-218ENST00000568205 WNT6Q9Y6F9 365 aa16.31■□□□□ 0.2
SPG7-218ENST00000568205 SLC9A3R1O14745 358 aaPredicted RBP16.3■□□□□ 0.2
SPG7-218ENST00000568205 ACSL4O60488 711 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 ASGR2P07307 311 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 ADRA1BP35368 520 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 IFNAR2P48551 515 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 SLC11A2P49281 568 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 MTA1Q13330 715 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 ARL13BQ3SXY8 428 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 C11orf63Q6NUN7 778 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 CPNE8Q86YQ8 564 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPG7-218ENST00000568205 CCDC185Q8N715 623 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 OSCP1Q8WVF1 389 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 NTAN1Q96AB6 310 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 TRMT61BQ9BVS5 477 aaKnown RBP16.3■□□□□ 0.2
SPG7-218ENST00000568205 TKTL2Q9H0I9 626 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 LZTFL1Q9NQ48 299 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 ANLNQ9NQW6 1124 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
SPG7-218ENST00000568205 XPO7Q9UIA9 1087 aaKnown RBP16.3■□□□□ 0.2
SPG7-218ENST00000568205 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 GUCA1BQ9UMX6 200 aa16.3■□□□□ 0.2
SPG7-218ENST00000568205 I6L893 689 aaPredicted RBP16.29■□□□□ 0.2
SPG7-218ENST00000568205 PRPSAP2O60256 369 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 PAGE1O75459 146 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 MOCS3O95396 460 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 TCF4P15884 667 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 GDI1P31150 447 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 SLC1A1P43005 524 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 SLC44A3Q8N4M1 653 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 RNF10Q8N5U6 811 aaKnown RBP16.29■□□□□ 0.2
SPG7-218ENST00000568205 OTUB2Q96DC9 234 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 ASIC4Q96FT7 647 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 PEBP4Q96S96 227 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 FAM83CQ9BQN1 747 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 LINC00597Q9H2U6 94 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 PCSK1NQ9UHG2 260 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
SPG7-218ENST00000568205 NUP210Q8TEM1 1887 aaPredicted RBP16.29■□□□□ 0.2
SPG7-218ENST00000568205 GRID2IPA4D2P6 1211 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 CHADO15335 359 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 SSR1P43307 286 aaKnown RBP16.28■□□□□ 0.2
SPG7-218ENST00000568205 AIF1P55008 147 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 SLC25A11Q02978 314 aaKnown RBP16.28■□□□□ 0.2
SPG7-218ENST00000568205 SCAPQ12770 1279 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 EML3Q32P44 896 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 HS1BP3Q53T59 392 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 FAM133BQ5BKY9 247 aaKnown RBP16.28■□□□□ 0.2
SPG7-218ENST00000568205 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 ADGRF1Q5T601 910 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 PIK3R6Q5UE93 754 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 CYP4V2Q6ZWL3 525 aaPredicted RBP16.28■□□□□ 0.2
SPG7-218ENST00000568205 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 DAAM2Q86T65 1068 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 CHSY1Q86X52 802 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 REXO1L1PQ8IX06 675 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 FAM217AQ8IXS0 508 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 LRRC57Q8N9N7 239 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 DDX50Q9BQ39 737 aaKnown RBP16.28■□□□□ 0.2
SPG7-218ENST00000568205 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
SPG7-218ENST00000568205 HYOU1Q9Y4L1 999 aa16.28■□□□□ 0.2
SPG7-218ENST00000568205 COL6A3P12111 3177 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 GOLGA6L7A0A1B0GV03 622 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 SPOPO43791 374 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 ARSAP15289 507 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 COMTP21964 271 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 IL1R2P27930 398 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 TAS2R40P59535 323 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 TDGQ13569 410 aa16.27■□□□□ 0.2
SPG7-218ENST00000568205 HADHQ16836 314 aaKnown RBP16.27■□□□□ 0.2
SPG7-218ENST00000568205 BOLA3Q53S33 107 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms