RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 DUSP4Q13115 394 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 PLCL1Q15111 1095 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 STILQ15468 1287 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 NFE2Q16621 373 aaPredicted RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 MEA1Q16626 185 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 MGAT5BQ3V5L5 792 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 HABP4Q5JVS0 413 aaKnown RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 SDHAF4Q5VUM1 108 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ALG1LQ6GMV1 187 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 LCLAT1Q6UWP7 414 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 CYP26C1Q6V0L0 522 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 C12orf40Q86WS4 652 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 TTC30AQ86WT1 665 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 SCN4BQ8IWT1 228 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 LRRC8AQ8IWT6 810 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ANKRD52Q8NB46 1076 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ZNF461Q8TAF7 563 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 SPPL2BQ8TCT7 592 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 FBF1Q8TES7 1133 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ASB16Q96NS5 453 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 SEPT5Q99719 369 aaPredicted RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 SMOQ99835 787 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 BAG1Q99933 345 aaPredicted RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 DUSP23Q9BVJ7 150 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 CEP44Q9C0F1 390 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 DEF6Q9H4E7 631 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 TLE6Q9H808 572 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 CYP4F11Q9HBI6 524 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 ARHGAP20Q9P2F6 1191 aa8.16□□□□□ -1.1
SMG1-214ENST00000568038 AFF4Q9UHB7 1163 aaKnown RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
SMG1-214ENST00000568038 MYO7AQ13402 2215 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 TMCO5BA8MYB1 307 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 TULP2O00295 520 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 DDX3XO00571 662 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG1-214ENST00000568038 ENC1O14682 589 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 BEST1O76090 585 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 GLUD1P00367 558 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 FAM200BP0CF97 657 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 HAPLN1P10915 354 aaPredicted RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 ATF2P15336 505 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 EPCAMP16422 314 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 GTF2F1P35269 517 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG1-214ENST00000568038 RGS7P49802 495 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 CLCN4P51793 760 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 CACNA2D1P54289 1103 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 BCAT1P54687 386 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 SLC8A3P57103 927 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 BST2Q10589 180 aaKnown RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 DDR2Q16832 855 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 TCEAL5Q5H9L2 206 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 NAA35Q5VZE5 725 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 TPGS2Q68CL5 300 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 LLGL2Q6P1M3 1020 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 VPS36Q86VN1 386 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 ZNF677Q86XU0 584 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 KREMEN2Q8NCW0 462 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 C1orf131Q8NDD1 294 aaKnown RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 STKLD1Q8NE28 680 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 SLC30A5Q8TAD4 765 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 C2orf15Q8WU43 125 aaKnown RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 CPA5Q8WXQ8 436 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 SMARCD1Q96GM5 515 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 FUBP3Q96I24 572 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG1-214ENST00000568038 CCDC42Q96M95 316 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 PPP1R9BQ96SB3 815 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 KCNK16Q96T55 309 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 SYT11Q9BT88 431 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 DUSP16Q9BY84 665 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 NHEJ1Q9H9Q4 299 aaPredicted RBP8.15□□□□□ -1.1
SMG1-214ENST00000568038 TMEM30AQ9NV96 361 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 ADAMTS1Q9UHI8 967 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 CEP83Q9Y592 693 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 U3KQE9 123 aa8.15□□□□□ -1.1
SMG1-214ENST00000568038 A0A087X0T9 212 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 SSU72P8A0A1W2PR75 194 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 F8VP50 259 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 AKR1B10O60218 316 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CYP1A1P04798 512 aaPredicted RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 FAM228BP0C875 321 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 ANXA13P27216 316 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CD96P40200 585 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 GPD2P43304 727 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 MAGEA11P43364 429 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TUFMP49411 452 aaKnown RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 NOMO3P69849 1222 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 RBM10P98175 930 aaKnown RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 CDK17Q00537 523 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 GFPT1Q06210 699 aaPredicted RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 MTF1Q14872 753 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 DUSP6Q16828 381 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CFAP221Q4G0U5 840 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 PMF1Q6P1K2 205 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 LILRA6Q6PI73 481 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms