RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 COL4A3Q01955 1670 aa27.16■■□□□ 1.94
NME3-209ENST00000566600 SYNJ2BP-COX16A0A087WUM0 186 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 MYBL1P10243 752 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 DRD1P21728 446 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 AVPR2P30518 371 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 GALK1P51570 392 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 GAB4Q2WGN9 574 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 TMEM196Q5HYL7 178 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 WDR59Q6PJI9 974 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 ZNF687Q8N1G0 1237 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 ATP6V0D2Q8N8Y2 350 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 BTN2A3PQ96KV6 586 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 XPO6Q96QU8 1125 aaKnown RBP27.15■■□□□ 1.94
NME3-209ENST00000566600 PARVAQ9NVD7 372 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 COX16Q9P0S2 106 aa27.15■■□□□ 1.94
NME3-209ENST00000566600 MTF2Q9Y483 593 aaPredicted RBP27.15■■□□□ 1.94
NME3-209ENST00000566600 ZDBF2Q9HCK1 2354 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 NEDD8-MDP1E9PL57 170 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 PDGFRAP16234 1089 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 ABCB4P21439 1286 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 RRM1P23921 792 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 SDC4P31431 198 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 OPRD1P41143 372 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 RPS9P46781 194 aaKnown RBP27.14■■□□□ 1.94
NME3-209ENST00000566600 MPPE1Q53F39 396 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 CLDN23Q96B33 292 aa27.14■■□□□ 1.94
NME3-209ENST00000566600 SSU72P8A0A1W2PR75 194 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 C2CD4BA6NLJ0 364 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 PI15O43692 258 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 TYRP14679 529 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 EIF4A3P38919 411 aaKnown RBP27.13■■□□□ 1.93
NME3-209ENST00000566600 PTPN9P43378 593 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 NUBP1P53384 320 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 DEUP1Q05D60 604 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 MAPK8IP2Q13387 824 aaPredicted RBP27.13■■□□□ 1.93
NME3-209ENST00000566600 SYNPOQ8N3V7 929 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 EMC1Q8N766 993 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 TMEM105Q8N8V8 129 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 RXFP2Q8WXD0 754 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 PNKPQ96T60 521 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 TBCBQ99426 244 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 DEF6Q9H4E7 631 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 LMAN1LQ9HAT1 526 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 MIA3Q5JRA6 1907 aa27.13■■□□□ 1.93
NME3-209ENST00000566600 A0A087X0T9 212 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 TCRBV5S1A1TA0A578 114 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 KCNU1A8MYU2 1149 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 CACNG3O60359 315 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 MOCS2O96007 188 aaPredicted RBP27.12■■□□□ 1.93
NME3-209ENST00000566600 PENKP01210 267 aaPredicted RBP27.12■■□□□ 1.93
NME3-209ENST00000566600 FAM228BP0C875 321 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 RFC1P35251 1148 aaPredicted RBP27.12■■□□□ 1.93
NME3-209ENST00000566600 CXCR3P49682 368 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 VCPP55072 806 aaKnown RBP27.12■■□□□ 1.93
NME3-209ENST00000566600 BRMS1LQ5PSV4 323 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 OTUD1Q5VV17 481 aaPredicted RBP27.12■■□□□ 1.93
NME3-209ENST00000566600 DCUN1D2Q6PH85 259 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 CCDC26Q8TAB7 109 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 JOSD2Q8TAC2 188 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 DDI1Q8WTU0 396 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 CFAP57Q96MR6 1250 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 DEC1Q9P2X7 70 aa27.12■■□□□ 1.93
NME3-209ENST00000566600 DCNP07585 359 aaKnown RBP27.11■■□□□ 1.93
NME3-209ENST00000566600 CHRNB1P11230 501 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 DESP17661 470 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 GPD1P21695 349 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 RDXP35241 583 aaKnown RBP27.11■■□□□ 1.93
NME3-209ENST00000566600 CCINQ13939 588 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 FBXO43Q4G163 708 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 PPP1R15BQ5SWA1 713 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 PLEKHA7Q6IQ23 1121 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 FSTL4Q6MZW2 842 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 TRNP1Q6NT89 227 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 ALKBH5Q6P6C2 394 aaKnown RBP27.11■■□□□ 1.93
NME3-209ENST00000566600 NUDT18Q6ZVK8 323 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 ETFBKMTQ8IXQ9 262 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 ZNF653Q96CK0 615 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 TMA16Q96EY4 203 aaKnown RBP27.11■■□□□ 1.93
NME3-209ENST00000566600 IER2Q9BTL4 223 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 WDCPQ9H6R7 721 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 PIGVQ9NUD9 493 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 SCINQ9Y6U3 715 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 MYOFQ9NZM1 2061 aa27.11■■□□□ 1.93
NME3-209ENST00000566600 TYW5A2RUC4 315 aaKnown RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 TULP3O75386 442 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 ENDOD1O94919 500 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 GJB6O95452 261 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 TFE3P19532 575 aaPredicted RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 CDC25BP30305 580 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 SLC6A11P48066 632 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 FZD5Q13467 585 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 MAMLD1Q13495 774 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 SLC18A3Q16572 532 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 CCDC14Q49A88 953 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 FAM133BQ5BKY9 247 aaKnown RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 CCDC122Q5T0U0 273 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 ACBD5Q5T8D3 534 aaPredicted RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 FYB2Q5VWT5 728 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 STRADAQ7RTN6 431 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 BNIPLQ7Z465 357 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms