RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 RLFQ13129 1914 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MAGEB16A2A368 324 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GSAPA4D1B5 854 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 A4D1N5 150 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 OR6C74A6NCV1 312 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 H0YIN7 160 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 H7C1D1 291 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NDUFS8O00217 210 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TRAF5O00463 557 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 BUB1BO60566 1050 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 SEC22BO75396 215 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MYBL1P10243 752 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PRLRP16471 622 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 RPS12P25398 132 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 RGS2P41220 211 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 OR1G1P47890 313 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PCP4P48539 62 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 KCNJ5P48544 419 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 FRG1Q14331 258 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 LASP1Q14847 261 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 LAPTM4AQ15012 233 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TAF1BQ53T94 588 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 NBPF12Q5TAG4 269 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 STRIP1Q5VSL9 837 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PDPK2PQ6A1A2 396 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CASC4Q6P4E1 433 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TRAT1Q6PIZ9 186 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SPATA21Q7Z572 469 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CHERPQ8IWX8 916 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 SPATA20Q8TB22 786 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ZSCAN18Q8TBC5 510 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 CAGE1Q8TC20 777 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ADAMTS15Q8TE58 950 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 WASF1Q92558 559 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 LRRC39Q96DD0 335 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SLC35A4Q96G79 324 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NECAB3Q96P71 396 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 MDFIQ99750 246 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 EFHD1Q9BUP0 239 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 KIFC3Q9BVG8 833 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NYXQ9GZU5 481 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 C8orf33Q9H7E9 229 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 TMEM206Q9H813 350 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 UPF2Q9HAU5 1272 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 TRPV5Q9NQA5 729 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GMIPQ9P107 970 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NCDNQ9UBB6 729 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CACNG4Q9UBN1 327 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PCOLCE2Q9UKZ9 415 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SCAF8Q9UPN6 1271 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 STRAPQ9Y3F4 350 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 PCDHA5Q9Y5H7 936 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GAKO14976 1311 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CBX4O00257 560 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MEIS1O00470 390 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SPINT1O43278 529 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TSPAN1O60635 241 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 RASSF9O75901 435 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NEBLO76041 1014 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PRPF6O94906 941 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 BAG4O95429 457 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 PENKP01210 267 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 ADRB2P07550 413 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 QDPRP09417 244 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SBK2P0C263 348 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 EN2P19622 333 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 AKAP5P24588 427 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CHRNA5P30532 468 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MAGEA4P43358 317 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GRIA4P48058 902 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 DHPSP49366 369 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 AFF1P51825 1210 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 HADHBP55084 474 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 SUMO3P55854 103 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 MAP3K7CLP57077 242 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NOP14P78316 857 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 RELQ04864 619 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 AUHQ13825 339 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 NAIF1Q69YI7 327 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 GTF2IRD2BQ6EKJ0 949 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TAF2Q6P1X5 1199 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 INTS5Q6P9B9 1019 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 LBX2Q6XYB7 198 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GTF2IRD2Q86UP8 949 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SLC51AQ86UW1 340 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 VWA5B2Q8N398 1253 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 C19orf47Q8N9M1 422 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 FAM71DQ8N9W8 422 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CHST14Q8NCH0 376 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 EHBP1Q8NDI1 1231 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 XAGE3Q8WTP9 111 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 RFFLQ8WZ73 363 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 KAT5Q92993 513 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PTP4A1Q93096 173 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ELMO3Q96BJ8 720 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ZNF669Q96BR6 464 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 APIPQ96GX9 242 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MFSD14AQ96MC6 490 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SLC6A18Q96N87 628 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NSUN5Q96P11 429 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms