RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TTC39BQ5VTQ0 682 aaPredicted RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 METTL3Q86U44 580 aaKnown RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 IRF2BP1Q8IU81 584 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.42■□□□□ 0.38
USB1-211ENST00000565662 HJURPQ8NCD3 748 aaPredicted RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 C1orf131Q8NDD1 294 aaKnown RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 TPSD1Q9BZJ3 242 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 PARD6AQ9NPB6 346 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 LMBRD1Q9NUN5 540 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 ANO10Q9NW15 660 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 PAXBP1Q9Y5B6 917 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 KCNJ18B7U540 433 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 PES1O00541 588 aaKnown RBP17.41■□□□□ 0.38
USB1-211ENST00000565662 ACSL4O60488 711 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 HSF2BPO75031 334 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 CAVIN2O95810 425 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 SLC9A1P19634 815 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 OXCT1P55809 520 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 YWHAZP63104 245 aaKnown RBP17.41■□□□□ 0.38
USB1-211ENST00000565662 ENPP2Q13822 863 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 KCNJ12Q14500 433 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 TCP11X2Q5H9J9 407 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 EGFLAMQ63HQ2 1017 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 IL31Q6EBC2 164 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 SASS6Q6UVJ0 657 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 RBM43Q6ZSC3 357 aaKnown RBP17.41■□□□□ 0.38
USB1-211ENST00000565662 CEP76Q8TAP6 659 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 PIWIL1Q96J94 861 aaKnown RBP17.41■□□□□ 0.38
USB1-211ENST00000565662 PPP1R9BQ96SB3 815 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 ZSWIM1Q9BR11 485 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 ELOVL2Q9NXB9 296 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 THAP10Q9P2Z0 257 aaPredicted RBP17.41■□□□□ 0.38
USB1-211ENST00000565662 SFMBT1Q9UHJ3 866 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 PLA2G4CQ9UP65 541 aa17.41■□□□□ 0.38
USB1-211ENST00000565662 PRRT4C9JH25 899 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 HOXD9P28356 352 aaPredicted RBP17.4■□□□□ 0.38
USB1-211ENST00000565662 SCNN1AP37088 669 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 CREB5Q02930 508 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 MESP2Q0VG99 397 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 SFSWAPQ12872 951 aaKnown RBP17.4■□□□□ 0.38
USB1-211ENST00000565662 LMAN2Q12907 356 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 FKBP15Q5T1M5 1219 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 ATP6V0D2Q8N8Y2 350 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 DQX1Q8TE96 717 aaKnown RBP17.4■□□□□ 0.38
USB1-211ENST00000565662 FOXJ1Q92949 421 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 BHMTQ93088 406 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 BTN2A3PQ96KV6 586 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 PDCL3Q9H2J4 239 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 SYNCQ9H7C4 482 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 PLCB1Q9NQ66 1216 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
USB1-211ENST00000565662 PLK2Q9NYY3 685 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 EVLQ9UI08 416 aaPredicted RBP17.4■□□□□ 0.38
USB1-211ENST00000565662 DNAJC12Q9UKB3 198 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 NFE2L3Q9Y4A8 694 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 THADAQ6YHU6 1953 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 CEP250Q9BV73 2442 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 NUP205Q92621 2012 aa17.4■□□□□ 0.38
USB1-211ENST00000565662 FRYLO94915 3013 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 A0A1W2PQF6 199 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 E5RJQ4 531 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 KHNYNO15037 678 aaKnown RBP17.39■□□□□ 0.37
USB1-211ENST00000565662 MOCS3O95396 460 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 LSM8O95777 96 aaKnown RBP17.39■□□□□ 0.37
USB1-211ENST00000565662 ASLP04424 464 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 GABRG2P18507 467 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 OXTRP30559 389 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 CDK17Q00537 523 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 STX1AQ16623 288 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 ZNF677Q86XU0 584 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 SCUBE3Q8IX30 993 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 FAM71AQ8IYT1 594 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 KDM1BQ8NB78 822 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 TMEM35BQ8NCS4 154 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 PPP1R13BQ96KQ4 1090 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 CIPCQ9C0C6 399 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 TJP2Q9UDY2 1190 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 SUSD2Q9UGT4 822 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.39■□□□□ 0.37
USB1-211ENST00000565662 STON1Q9Y6Q2 735 aa17.39■□□□□ 0.37
USB1-211ENST00000565662 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.38■□□□□ 0.37
USB1-211ENST00000565662 BECN2A8MW95 431 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 MSI1O43347 362 aaKnown RBP17.38■□□□□ 0.37
USB1-211ENST00000565662 ABCB4P21439 1286 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 ZBTB16Q05516 673 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 SLC12A1Q13621 1099 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 MAP7D1Q3KQU3 841 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 MIIPQ5JXC2 388 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 SYCP2LQ5T4T6 812 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 PIK3R6Q5UE93 754 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 LYSMD4Q5XG99 296 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 DENND1BQ6P3S1 775 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 SERPINA13PQ6UXR4 307 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 C11orf57Q6ZUT1 292 aaPredicted RBP17.38■□□□□ 0.37
USB1-211ENST00000565662 SYT12Q8IV01 421 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 MFN1Q8IWA4 741 aa17.38■□□□□ 0.37
USB1-211ENST00000565662 NDRG1Q92597 394 aaKnown RBP17.38■□□□□ 0.37
USB1-211ENST00000565662 SLC39A13Q96H72 371 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms