RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 OR2I1PQ8NGU4 316 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 DDI1Q8WTU0 396 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 HSPA12BQ96MM6 686 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 CNGB3Q9NQW8 809 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 OLA1Q9NTK5 396 aaKnown RBP24.79■■□□□ 1.56
RAB40C-209ENST00000565511 ELOVL2Q9NXB9 296 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 PCNX2A6NKB5 2137 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 KCNJ18B7U540 433 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 KRT37O76014 449 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 CFIP05156 583 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 CNGA2Q16280 664 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 MSANTD2Q6P1R3 559 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 TRIML1Q8N9V2 468 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 WFDC5Q8TCV5 224 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 RNF139Q8WU17 664 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 NUSAP1Q9BXS6 441 aaKnown RBP24.78■■□□□ 1.56
RAB40C-209ENST00000565511 CAPN10Q9HC96 672 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 STOML2Q9UJZ1 356 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 ANGPTL2Q9UKU9 493 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 KIAA1257Q9ULG3 409 aa24.78■■□□□ 1.56
RAB40C-209ENST00000565511 GOLGA6L7A0A1B0GV03 622 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 ZNF217O75362 1048 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 TOP3BO95985 862 aaKnown RBP24.77■■□□□ 1.56
RAB40C-209ENST00000565511 IGLV3-27P01718 113 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 CYBBP04839 570 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 HLA-EP13747 358 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 HLA-FP30511 346 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 COPAP53621 1224 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 ZNF252P-AS1Q0IIN9 211 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 KCNH2Q12809 1159 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 FOXR2Q6PJQ5 311 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 CACUL1Q86Y37 369 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 EHBP1Q8NDI1 1231 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 DEFB124Q8NES8 71 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 MYEOVQ96EZ4 313 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 INTS2Q9H0H0 1204 aaKnown RBP24.77■■□□□ 1.56
RAB40C-209ENST00000565511 ABCC13Q9NSE7 274 aa24.77■■□□□ 1.56
RAB40C-209ENST00000565511 USP36Q9P275 1121 aaKnown RBP24.77■■□□□ 1.56
RAB40C-209ENST00000565511 P4HA2O15460 535 aa24.76■■□□□ 1.55
RAB40C-209ENST00000565511 FYNP06241 537 aa24.76■■□□□ 1.55
RAB40C-209ENST00000565511 SHC2P98077 582 aa24.76■■□□□ 1.55
RAB40C-209ENST00000565511 RFWD3Q6PCD5 774 aa24.76■■□□□ 1.55
RAB40C-209ENST00000565511 MED15Q96RN5 788 aa24.76■■□□□ 1.55
RAB40C-209ENST00000565511 CIPCQ9C0C6 399 aa24.76■■□□□ 1.55
RAB40C-209ENST00000565511 NCAM1P13591 858 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 SLC6A4P31645 630 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 PPP1R2P41236 205 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 HARS2P49590 506 aaKnown RBP24.75■■□□□ 1.55
RAB40C-209ENST00000565511 MARSP56192 900 aaKnown RBP24.75■■□□□ 1.55
RAB40C-209ENST00000565511 GCNT1Q02742 428 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 LMAN2Q12907 356 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 PAK1Q13153 545 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 DUOXA1Q1HG43 343 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 MPPE1Q53F39 396 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 FAM133BQ5BKY9 247 aaKnown RBP24.75■■□□□ 1.55
RAB40C-209ENST00000565511 DENND1BQ6P3S1 775 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 ZNF366Q8N895 744 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 CYB5D2Q8WUJ1 264 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 ZNF419Q96HQ0 510 aaPredicted RBP24.75■■□□□ 1.55
RAB40C-209ENST00000565511 SRRTQ9BXP5 876 aaKnown RBP24.75■■□□□ 1.55
RAB40C-209ENST00000565511 SLC2A11Q9BYW1 496 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 PRDM16Q9HAZ2 1276 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 SLC6A14Q9UN76 642 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 WASF3Q9UPY6 502 aa24.75■■□□□ 1.55
RAB40C-209ENST00000565511 LTFP02788 710 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 SERPINF2P08697 491 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 CSRP1P21291 193 aaKnown RBP24.74■■□□□ 1.55
RAB40C-209ENST00000565511 MAOBP27338 520 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 HOXD12P35452 270 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 APBA1Q02410 837 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 STARD3Q14849 445 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 EIF4HQ15056 248 aaKnown RBP24.74■■□□□ 1.55
RAB40C-209ENST00000565511 ADGRF1Q5T601 910 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 NADSYN1Q6IA69 706 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 IRGQQ8WZA9 623 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 TOE1Q96GM8 510 aaKnown RBP24.74■■□□□ 1.55
RAB40C-209ENST00000565511 GTPBP2Q9BX10 602 aaKnown RBP24.74■■□□□ 1.55
RAB40C-209ENST00000565511 MIS12Q9H081 205 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 ACP6Q9NPH0 428 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 ABCB8Q9NUT2 735 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 CYTH4Q9UIA0 394 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 CNTN6Q9UQ52 1028 aa24.74■■□□□ 1.55
RAB40C-209ENST00000565511 BICDL2A1A5D9 508 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 ZBTB24O43167 697 aaPredicted RBP24.73■■□□□ 1.55
RAB40C-209ENST00000565511 AFPP02771 609 aaKnown RBP24.73■■□□□ 1.55
RAB40C-209ENST00000565511 SPINK2P20155 84 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 GJB7Q6PEY0 223 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 ADIPOR2Q86V24 386 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 TMPRSS6Q8IU80 811 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 UCMAQ8WVF2 138 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 PRICKLE1Q96MT3 831 aaPredicted RBP24.73■■□□□ 1.55
RAB40C-209ENST00000565511 WSB2Q9NYS7 404 aaPredicted RBP24.73■■□□□ 1.55
RAB40C-209ENST00000565511 IGF2RP11717 2491 aa24.73■■□□□ 1.55
RAB40C-209ENST00000565511 AKAP13Q12802 2813 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 LATS1O95835 1130 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 CD6P30203 668 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 CD70P32970 193 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 DPP6P42658 865 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 GPD2P43304 727 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 RPL34P49207 117 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms