RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 RFX4Q33E94 735 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 FAM228AQ86W67 206 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MEIOBQ8N635 442 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 APOPT1Q96IL0 206 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MUC13Q9H3R2 512 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 BSDC1Q9NW68 430 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 TBC1D30Q9Y2I9 924 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 RGS14O43566 566 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MYL3P08590 195 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 RAG1P15918 1043 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ALDH3A2P51648 485 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CASP5P51878 434 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CDC42P60953 191 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 RIPK1Q13546 671 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PCSK7Q16549 785 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ALG11Q2TAA5 492 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PGS1Q32NB8 556 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 RIPOR1Q6ZS17 1223 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 SLC44A2Q8IWA5 706 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 SIX5Q8N196 739 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 COA1Q9GZY4 146 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PLOD3O60568 738 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CYP2C9P11712 490 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PHKG2P15735 406 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MZF1P28698 734 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 KPNA1P52294 538 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 GRIK3Q13003 919 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MTF1Q14872 753 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 NUMA1Q14980 2115 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 FAM187BQ17R55 369 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PREPLQ4J6C6 727 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 NIF3L1Q9GZT8 377 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 TMEM117Q9H0C3 514 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 KCTD10Q9H3F6 313 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 GREM2Q9H772 168 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ZC3H11AO75152 810 aaKnown RBP eCLIP5.21□□□□□ -1.589e-7■■■■■ 28.2
SMG1-211ENST00000565324 SOX11P35716 441 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 SLC16A2P36021 539 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 GP5P40197 560 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 DPYDQ12882 1025 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 SNRNP35Q16560 246 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 RABL6Q3YEC7 729 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 PDPRQ8NCN5 879 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 RP9Q8TA86 221 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 ITFG1Q8TB96 612 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 GPRASP2Q96D09 838 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 SGF29Q96ES7 293 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CRELD1Q96HD1 420 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CLK4Q9HAZ1 481 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 HPS4Q9NQG7 708 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ST3GAL5Q9UNP4 418 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ERGIC3Q9Y282 383 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PCDHA10Q9Y5I2 948 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 A0A088AWK7 358 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 TPD52L2O43399 206 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 CHRNGP07510 517 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ERVK-10P10266 1014 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ZNF10P21506 573 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 ZMYND11Q15326 602 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 DGKDQ16760 1214 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 DOK7Q18PE1 504 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 XKR3Q5GH77 459 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 GRTP1Q5TC63 336 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PAPD7Q5XG87 772 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 CXXC5Q7LFL8 322 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 VN1R5Q7Z5H4 357 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 COMMD2Q86X83 199 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 TC2NQ8N9U0 490 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 OR2W6PQ8NHA6 318 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PTCD3Q96EY7 689 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 DPY30Q9C005 99 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PUS7LQ9H0K6 701 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 LY9Q9HBG7 655 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 SEC31BQ9NQW1 1179 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PTPRKQ15262 1439 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 OPLAHO14841 1288 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ATP4AP20648 1035 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 RPL3P39023 403 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 SLC1A6P48664 564 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 DYNLL1P63167 89 aaKnown RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 CYP24A1Q07973 514 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 C17orf75Q9HAS0 396 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 NMRAL1Q9HBL8 299 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 PNPLA8Q9NP80 782 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ZNF221Q9UK13 617 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 VANGL2Q9ULK5 521 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 SSR3Q9UNL2 185 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MFHAS1Q9Y4C4 1052 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CROCCQ5TZA2 2017 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 TBX3O15119 743 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 HS6ST1O60243 411 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CPA3P15088 417 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 GSSP48637 474 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 ZNF135P52742 658 aaPredicted RBP5.21□□□□□ -1.58
SMG1-211ENST00000565324 CDH4P55283 916 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 MYL6P60660 151 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 FIG4Q92562 907 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 GSDMCQ9BYG8 508 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 CAB39LQ9H9S4 337 aa5.21□□□□□ -1.58
SMG1-211ENST00000565324 LRRC14BA6NHZ5 514 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms