RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 LRRC4Q9HBW1 653 aa19.32■□□□□ 0.68
CLN6-204ENST00000564752 OLA1Q9NTK5 396 aaKnown RBP19.32■□□□□ 0.68
CLN6-204ENST00000564752 ELOVL2Q9NXB9 296 aa19.32■□□□□ 0.68
CLN6-204ENST00000564752 KIAA1257Q9ULG3 409 aa19.32■□□□□ 0.68
CLN6-204ENST00000564752 ASPMQ8IZT6 3477 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 NDUFS2O75306 463 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 PAEPP09466 180 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 ATXN3P54252 364 aaPredicted RBP19.31■□□□□ 0.68
CLN6-204ENST00000564752 FOXC1Q12948 553 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 SEMA3BQ13214 749 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 KIAA1324Q6UXG2 1013 aaKnown RBP19.31■□□□□ 0.68
CLN6-204ENST00000564752 ANKS1BQ7Z6G8 1248 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 CREBRFQ8IUR6 639 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 FMNL3Q8IVF7 1028 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 MLKLQ8NB16 471 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 RBBP8NLQ8NC74 664 aaPredicted RBP19.31■□□□□ 0.68
CLN6-204ENST00000564752 UBA3Q8TBC4 463 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 DDI1Q8WTU0 396 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 KCTD13Q8WZ19 329 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 FOXJ1Q92949 421 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 KAT5Q92993 513 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 GTPBP2Q9BX10 602 aaKnown RBP19.31■□□□□ 0.68
CLN6-204ENST00000564752 MKRN2Q9H000 416 aaKnown RBP19.31■□□□□ 0.68
CLN6-204ENST00000564752 NUP62CLQ9H1M0 184 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 PRDM16Q9HAZ2 1276 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 ITM2CQ9NQX7 267 aa19.31■□□□□ 0.68
CLN6-204ENST00000564752 TNRC6BQ9UPQ9 1833 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 PI4KAP42356 2102 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 YJEFN3A6XGL0 299 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 E7ENQ6 273 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 O00370 1275 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 ARHGAP33O14559 1287 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 TIMM44O43615 452 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 SETSIPP0DME0 302 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 CD6P30203 668 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 HARS2P49590 506 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 GCNT1Q02742 428 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 ADIGQ0VDE8 80 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 EIF4HQ15056 248 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 E2F5Q15329 346 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 PKDCCQ504Y2 493 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 BSPRYQ5W0U4 402 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 TMEM215Q68D42 235 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 RRAGAQ7L523 313 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 ARHGEF19Q8IW93 802 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 SCML4Q8N228 414 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 EHBP1Q8NDI1 1231 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 RNF139Q8WU17 664 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 IPO9Q96P70 1041 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 INTS2Q9H0H0 1204 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 WSB2Q9NYS7 404 aaPredicted RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 USP36Q9P275 1121 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 SFMBT1Q9UHJ3 866 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 STOML2Q9UJZ1 356 aa19.3■□□□□ 0.68
CLN6-204ENST00000564752 HBS1LQ9Y450 684 aaKnown RBP19.3■□□□□ 0.68
CLN6-204ENST00000564752 OPHN1O60890 802 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 PROS1P07225 676 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 ZNF234Q14588 700 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 TPD52L1Q16890 204 aaPredicted RBP19.29■□□□□ 0.68
CLN6-204ENST00000564752 MPPE1Q53F39 396 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 SYCP2LQ5T4T6 812 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 TMPRSS6Q8IU80 811 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 RGL4Q8IZJ4 473 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 HDDC3Q8N4P3 179 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 EDEM1Q92611 657 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 TOE1Q96GM8 510 aaKnown RBP19.29■□□□□ 0.68
CLN6-204ENST00000564752 ABCC13Q9NSE7 274 aa19.29■□□□□ 0.68
CLN6-204ENST00000564752 RALYQ9UKM9 306 aaKnown RBP19.29■□□□□ 0.68
CLN6-204ENST00000564752 CACNA1EQ15878 2313 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SYNCRIPO60506 623 aaKnown RBP19.28■□□□□ 0.68
CLN6-204ENST00000564752 TOP3BO95985 862 aaKnown RBP19.28■□□□□ 0.68
CLN6-204ENST00000564752 SYPP08247 313 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SPINK2P20155 84 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 HOXD9P28356 352 aaPredicted RBP19.28■□□□□ 0.68
CLN6-204ENST00000564752 WDR45BQ5MNZ6 344 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 CLEC17AQ6ZS10 378 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SIX6OS1Q8N1H7 587 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 MINDY1Q8N5J2 469 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SLC35F5Q8WV83 523 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SORCS1Q8WY21 1168 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 TFAP2BQ92481 460 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SIPA1Q96FS4 1042 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 MED15Q96RN5 788 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 CIPCQ9C0C6 399 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 CNGB3Q9NQW8 809 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 SUSD2Q9UGT4 822 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 PCNX2A6NKB5 2137 aa19.28■□□□□ 0.68
CLN6-204ENST00000564752 C1QTNF9BB2RNN3 333 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 M0QYV0 167 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 TSPAN3O60637 253 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 GABBR2O75899 941 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 LATS1O95835 1130 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 C1QTNF9P0C862 333 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 NCAM1P13591 858 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 LCP1P13796 627 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 BRD2P25440 801 aaKnown RBP19.27■□□□□ 0.68
CLN6-204ENST00000564752 MAOBP27338 520 aa19.27■□□□□ 0.68
CLN6-204ENST00000564752 TPMTP51580 245 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms