RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MSANTD2Q6P1R3 559 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 LMO3Q8TAP4 145 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 NELFBQ8WX92 580 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 GOLGA1Q92805 767 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC32A1Q9H598 525 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 PLA2G4CQ9UP65 541 aa12.72□□□□□ -0.37
GTF3C1-204ENST00000564664 WASH3PC4AMC7 463 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 IRAK2O43187 625 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 SART1O43290 800 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 CD6P30203 668 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC11A2P49281 568 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 DAOAP59103 153 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 ARID5AQ03989 594 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC14A1Q13336 389 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 HNRNPDQ14103 355 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 MEA1Q16626 185 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 GEN1Q17RS7 908 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 FUT11Q495W5 492 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 SH3PXD2AQ5TCZ1 1133 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 BEND5Q7L4P6 421 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 ENOSF1Q7L5Y1 443 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIM59Q8IWR1 403 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 HDDC3Q8N4P3 179 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIML1Q8N9V2 468 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 P2RY11Q96G91 374 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 DDX50Q9BQ39 737 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 NUP58Q9BVL2 599 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 ZDHHC5Q9C0B5 715 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 FBRSQ9HAH7 460 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 CAPN10Q9HC96 672 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 SFMBT1Q9UHJ3 866 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 RAD54BQ9Y620 910 aa12.71□□□□□ -0.37
GTF3C1-204ENST00000564664 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.38
GTF3C1-204ENST00000564664 CHD8Q9HCK8 2581 aa12.71□□□□□ -0.38
GTF3C1-204ENST00000564664 IGLV3-19P01714 112 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 NCAM1P13591 858 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 LCP1P13796 627 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 BMP6P22004 513 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 HOXD9P28356 352 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 IL12RB1P42701 662 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 ACADSBP45954 432 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 PAK1Q13153 545 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 ZNF234Q14588 700 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 KLHL10Q6JEL2 608 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 PMF1Q6P1K2 205 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 KIAA1324Q6UXG2 1013 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 KIAA0907Q7Z7F0 614 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 TMPRSS6Q8IU80 811 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 DNASE2BQ8WZ79 361 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 EDEM1Q92611 657 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 PRCCQ92733 491 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 SIPA1Q96FS4 1042 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 WSB2Q9NYS7 404 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 ASCC3Q8N3C0 2202 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-204ENST00000564664 CEP192Q8TEP8 1941 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 M0QYV0 167 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 RNF225M0QZC1 329 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 ARHGAP33O14559 1287 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 MED7O43513 233 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 OPHN1O60890 802 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 IGLV3-27P01718 113 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 AFPP02771 609 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 LTFP02788 710 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 CFIP05156 583 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 ATP5BP06576 529 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 ACADMP11310 421 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 NNTQ13423 1086 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 UAP1L1Q3KQV9 507 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 SLC41A1Q8IVJ1 513 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 TOE1Q96GM8 510 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 SRRTQ9BXP5 876 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 CIPCQ9C0C6 399 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 DNAAF2Q9NVR5 837 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms