RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PIWIL1Q96J94 861 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CFAP57Q96MR6 1250 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TTC25Q96NG3 672 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HNRNPABQ99729 332 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SYT15Q9BQS2 421 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MED10Q9BTT4 135 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TTPALQ9BTX7 342 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ROPN1BQ9BZX4 212 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SEMA4AQ9H3S1 761 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CNOT10Q9H9A5 744 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ROPN1Q9HAT0 212 aaPredicted RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CLDND1Q9NY35 253 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 STK39Q9UEW8 545 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TPX2Q9ULW0 747 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PATJQ8NI35 1801 aa7.72□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PLXNA3P51805 1871 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TLDC2A0PJX2 215 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ARHGEF37A1IGU5 675 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CFAP69A5D8W1 941 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SMIM23A6NLE4 172 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SRRM3A6NNA2 597 aaPredicted RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZNF487B1APH4 448 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MDM4O15151 490 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LINC01565O15544 149 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ENDOD1O94919 500 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FBXO21O94952 628 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ACSL3O95573 720 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TTC4O95801 387 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SHBGP04278 402 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ABHD2P08910 425 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FAM200BP0CF97 657 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LCP1P13796 627 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NPR3P17342 541 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PTPN1P18031 435 aaKnown RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PAX3P23760 479 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LMO2P25791 158 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PCSK1P29120 753 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LHX1P48742 406 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NDUFV1P49821 464 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 IRAK1P51617 712 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ARPP19P56211 112 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 EIF3EP60228 445 aaKnown RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MAGOHP61326 146 aaKnown RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ROR1Q01973 937 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 DSG1Q02413 1049 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 DPYSL3Q14195 570 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NOMO1Q15155 1222 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PSMD5Q16401 504 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZSCAN26Q16670 478 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SKIDA1Q1XH10 827 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MDH1BQ5I0G3 518 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 WSCD1Q658N2 575 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CD300LGQ6UXG3 332 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CYP4V2Q6ZWL3 525 aaPredicted RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RELL1Q8IUW5 271 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SIX6OS1Q8N1H7 587 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SPATA18Q8TC71 538 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 EPS8L3Q8TE67 593 aaKnown RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SUSD3Q96L08 255 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SENP8Q96LD8 212 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 KLHL5Q96PQ7 755 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RBM15Q96T37 977 aaKnown RBP eCLIP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LPIN3Q9BQK8 851 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CCDC77Q9BR77 488 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZNF670Q9BS34 389 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TMEM121Q9BTD3 319 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SNRNP25Q9BV90 132 aaKnown RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 EMILIN2Q9BXX0 1053 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 DUSP16Q9BY84 665 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PHACTR1Q9C0D0 580 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 LRRC4Q9HBW1 653 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PCDH18Q9HCL0 1135 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 KRT82Q9NSB4 513 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 NINJ2Q9NZG7 142 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CALCOCO1Q9P1Z2 691 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 STAP1Q9ULZ2 295 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SSX2IPQ9Y2D8 614 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TIMM13Q9Y5L4 95 aaPredicted RBP7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PTPRDP23468 1912 aa7.71□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MYO16Q9Y6X6 1858 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MTCL1Q9Y4B5 1905 aaKnown RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 A0A087WUV0 522 aaPredicted RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 H7C0C1 242 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 GABRDO14764 452 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 SYN3O14994 580 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 TP73O15350 636 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CLASP2O75122 1294 aaKnown RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ADH1AP07327 375 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CD48P09326 243 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 CNPP09543 421 aaKnown RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 RBP3P10745 1247 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ODC1P11926 461 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 PECAM1P16284 738 aaPredicted RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ZFXP17010 805 aaPredicted RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 FGFR3P22607 806 aa7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ACAT1P24752 427 aaKnown RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 MDH1P40925 334 aaKnown RBP7.7□□□□□ -1.18
MAP1LC3B-205ENST00000564638 ATP5OP48047 213 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms