RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 A0A1W2PQH9 124 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 DLL1O00548 723 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 GOT1P17174 413 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 OR1D2P34982 312 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 HSD17B3P37058 310 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 KPNA1P52294 538 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 TPI1P60174 286 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 FPGSQ05932 587 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 SEMA3BQ13214 749 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 PAFAH1B3Q15102 231 aaKnown RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 PDK1Q15118 436 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 RSPO2Q6UXX9 243 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 RELL1Q8IUW5 271 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 ZNF461Q8TAF7 563 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 UBLCP1Q8WVY7 318 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 TTLL2Q9BWV7 592 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 TKTL2Q9H0I9 626 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 PABPC3Q9H361 631 aaKnown RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 ARHGEF4Q9NR80 690 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 SAE1Q9UBE0 346 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 MRPL42Q9Y6G3 142 aaKnown RBP16.1■□□□□ 0.17
COMMD4-210ENST00000564587 COL4A6Q14031 1691 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
COMMD4-210ENST00000564587 WDR27A2RRH5 827 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 GOLGA8KD6RF30 607 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 PPP1R12AO14974 1030 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 CREB3O43889 395 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 ABLIM3O94929 683 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 ACRP10323 421 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 AMPD1P23109 780 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 SERPINB6P35237 376 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 VPS41P49754 854 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 HTRA4P83105 476 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 NRG1Q02297 640 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 DUSP4Q13115 394 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 DPYSQ14117 519 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 SLC45A4Q5BKX6 768 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 NCBP2-AS2Q69YL0 99 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 NPNTQ6UXI9 565 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 ZC3H18Q86VM9 953 aaKnown RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 PPIL6Q8IXY8 311 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 FIBCD1Q8N539 461 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 ZCCHC9Q8N567 271 aaKnown RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 ADAM32Q8TC27 787 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 VN1R3Q9BXE9 311 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 FRMD8Q9BZ67 464 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
COMMD4-210ENST00000564587 DONSONQ9NYP3 566 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 SLC12A6Q9UHW9 1150 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 TLR6Q9Y2C9 796 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 SLC27A5Q9Y2P5 690 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 ATP8A1Q9Y2Q0 1164 aa16.09■□□□□ 0.17
COMMD4-210ENST00000564587 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 SLC38A8A6NNN8 435 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 ZBBXA8MT70 800 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 GJB5O95377 273 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 VNN2O95498 520 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 CSH1P0DML2 217 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 CSH2P0DML3 217 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 MX2P20592 715 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 GGCXP38435 758 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 GPR15P49685 360 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 RAB33AQ14088 237 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 DENND2CQ68D51 928 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 FAM117BQ6P1L5 589 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 PPP1R21Q6ZMI0 780 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 UNC45BQ8IWX7 931 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 PYROXD2Q8N2H3 581 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 FAM71DQ8N9W8 422 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 PHOSPHO2Q8TCD6 241 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.16
COMMD4-210ENST00000564587 C1orf74Q96LT6 269 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 ZIM3Q96PE6 472 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 QKIQ96PU8 341 aaKnown RBP eCLIP16.08■□□□□ 0.16
COMMD4-210ENST00000564587 SH3GL2Q99962 352 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 MTIF3Q9H2K0 278 aaKnown RBP16.08■□□□□ 0.16
COMMD4-210ENST00000564587 NMUR1Q9HB89 426 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 MRPL17Q9NRX2 175 aaKnown RBP16.08■□□□□ 0.16
COMMD4-210ENST00000564587 GMIPQ9P107 970 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 OR12D3Q9UGF7 316 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 PLAAQ9Y263 795 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 INSL6Q9Y581 213 aa16.08■□□□□ 0.16
COMMD4-210ENST00000564587 DCLK1O15075 740 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 EIF3HO15372 352 aaKnown RBP eCLIP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 KCNN4O15554 427 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 MTSS1O43312 755 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 GCATO75600 419 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 APOEP02649 317 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 NUDT17P0C025 328 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 OAS2P29728 719 aaKnown RBP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 ELF1P32519 619 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 RPL22P35268 128 aaKnown RBP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 ALDH1A3P47895 512 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms