RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 CCDC65Q8IXS2 484 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF366Q8N895 744 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 SLC2A14Q8TDB8 520 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 DDI1Q8WTU0 396 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 P2RY11Q96G91 374 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 PIWIL1Q96J94 861 aaKnown RBP7.69□□□□□ -1.18
VPS4A-203ENST00000564399 ELF4Q99607 663 aaPredicted RBP7.69□□□□□ -1.18
VPS4A-203ENST00000564399 PANK2Q9BZ23 570 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 DCLK3Q9C098 648 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 NMUR1Q9HB89 426 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 AASDHPPTQ9NRN7 309 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 FAM49BQ9NUQ9 324 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 OSER1Q9NX31 292 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 RASAL2Q9UJF2 1139 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 NAGPAQ9UK23 515 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 PLA2G4CQ9UP65 541 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 SCML2Q9UQR0 700 aa7.69□□□□□ -1.18
VPS4A-203ENST00000564399 B8ZZF3 427 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CLIC2O15247 247 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 SLC28A2O43868 658 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 KIF20AO95235 890 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 STAU1O95793 577 aaKnown RBP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 KLKB1P03952 638 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 FAM200BP0CF97 657 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 RALAP11233 206 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 TRIM21P19474 475 aaKnown RBP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 GJB2P29033 226 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CORO1AP31146 461 aaKnown RBP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 STAT6P42226 847 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ARRB1P49407 418 aaPredicted RBP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 TMPRSS3P57727 454 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 COG7P83436 770 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ZBTB16Q05516 673 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CYP24A1Q07973 514 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 EFEMP1Q12805 493 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CAMK2GQ13555 558 aaPredicted RBP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 LY6DQ14210 128 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 PSMD6Q15008 389 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF699Q32M78 642 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 TBC1D25Q3MII6 688 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 KIAA0895LQ68EN5 471 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 KDM7AQ6ZMT4 941 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 GPRIN1Q7Z2K8 1008 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 LURAP1LQ8IV03 231 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 DENND1CQ8IV53 801 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF248Q8NDW4 579 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CYB5D2Q8WUJ1 264 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF516Q92618 1163 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ELMO3Q96BJ8 720 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 WBP1Q96G27 269 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 SLC6A18Q96N87 628 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 SLC2A11Q9BYW1 496 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 XYLT2Q9H1B5 865 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 SGK2Q9HBY8 427 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CPNE5Q9HCH3 593 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CSNK1G1Q9HCP0 422 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CLEC4EQ9ULY5 219 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 CLCA2Q9UQC9 943 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 NCKAP1Q9Y2A7 1128 aa7.68□□□□□ -1.18
VPS4A-203ENST00000564399 SPTAN1Q13813 2472 aaKnown RBP7.68□□□□□ -1.18
VPS4A-203ENST00000564399 ATMQ13315 3056 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 A0A1W2PPC4 97 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 FRMD3A2A2Y4 597 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 YKT6O15498 198 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 WISP1O95388 367 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 IGHV4-34P06331 123 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 C6P13671 934 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 P4HA1P13674 534 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 CKMT2P17540 419 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 PSEN1P49768 467 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 NDST1P52848 882 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 UCNP55089 124 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 PCBP4P57723 403 aaKnown RBP7.67□□□□□ -1.18
VPS4A-203ENST00000564399 RPS14P62263 151 aaKnown RBP7.67□□□□□ -1.18
VPS4A-203ENST00000564399 ILKQ13418 452 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 TMEM215Q68D42 235 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 ZNF776Q68DI1 518 aaPredicted RBP7.67□□□□□ -1.18
VPS4A-203ENST00000564399 CCDC73Q6ZRK6 1079 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 CHST9Q7L1S5 443 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 RSRC2Q7L4I2 434 aaKnown RBP7.67□□□□□ -1.18
VPS4A-203ENST00000564399 BRAPQ7Z569 592 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 ERICH1Q86X53 443 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 C12orf29Q8N999 325 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 XXYLT1Q8NBI6 393 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 SAP25Q8TEE9 199 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 GOLGA1Q92805 767 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 HPS3Q969F9 1004 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 CDK5RAP1Q96SZ6 601 aaKnown RBP7.67□□□□□ -1.18
VPS4A-203ENST00000564399 SEMA4CQ9C0C4 833 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 SDCBP2Q9H190 292 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 FBRSQ9HAH7 460 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 PRSS16Q9NQE7 514 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 GDF3Q9NR23 364 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 AGO1Q9UL18 857 aaKnown RBP7.67□□□□□ -1.18
VPS4A-203ENST00000564399 STRIP2Q9ULQ0 834 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 PCDHA5Q9Y5H7 936 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 KIF26BQ2KJY2 2108 aa7.67□□□□□ -1.18
VPS4A-203ENST00000564399 NBASA2RRP1 2371 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms