RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 PIWIL1Q96J94 861 aaKnown RBP15.43■□□□□ 0.06
SNX29-203ENST00000564111 PARD6AQ9NPB6 346 aa15.43■□□□□ 0.06
SNX29-203ENST00000564111 PLCB1Q9NQ66 1216 aa15.43■□□□□ 0.06
SNX29-203ENST00000564111 THAP10Q9P2Z0 257 aaPredicted RBP15.43■□□□□ 0.06
SNX29-203ENST00000564111 SLC30A4O14863 429 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 MAP3K13O43283 966 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 AP5Z1O43299 807 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 OXCT1P55809 520 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 CDK17Q00537 523 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 PLA2G2CQ5R387 149 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 RNF43Q68DV7 783 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 ATP6V0D2Q8N8Y2 350 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 DQX1Q8TE96 717 aaKnown RBP15.42■□□□□ 0.06
SNX29-203ENST00000564111 HMGB4Q8WW32 186 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 SIX2Q9NPC8 291 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 SFMBT1Q9UHJ3 866 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 PAXBP1Q9Y5B6 917 aa15.42■□□□□ 0.06
SNX29-203ENST00000564111 BCLAF3A2AJT9 711 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 LSM8O95777 96 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 ASLP04424 464 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 YWHAZP63104 245 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 ENPP2Q13822 863 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 MIIPQ5JXC2 388 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 C11orf57Q6ZUT1 292 aaPredicted RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 ZNF677Q86XU0 584 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 FAM71AQ8IYT1 594 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 TMEM35BQ8NCS4 154 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 ARRDC1-AS1Q9H2J1 176 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 NFE2L3Q9Y4A8 694 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 WDFY4Q6ZS81 3184 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 BECN2A8MW95 431 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 PES1O00541 588 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 SYNCRIPO60506 623 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 NDRG1Q92597 394 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 RMDN1Q96DB5 314 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 PPP1R13BQ96KQ4 1090 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 TPSD1Q9BZJ3 242 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 NAT10Q9H0A0 1025 aaKnown RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 ELOVL2Q9NXB9 296 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 EVLQ9UI08 416 aaPredicted RBP15.41■□□□□ 0.06
SNX29-203ENST00000564111 STON1Q9Y6Q2 735 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 CKAP5Q14008 2032 aa15.41■□□□□ 0.06
SNX29-203ENST00000564111 THADAQ6YHU6 1953 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 PRRT4C9JH25 899 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 E5RJQ4 531 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 ATP5BP06576 529 aaKnown RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 OXTRP30559 389 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 SFSWAPQ12872 951 aaKnown RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 EMC10Q5UCC4 262 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 ZNF397Q8NF99 534 aaPredicted RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 CEP76Q8TAP6 659 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 BTN2A3PQ96KV6 586 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 FCRL2Q96LA5 508 aaPredicted RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 MUC22E2RYF6 1773 aaPredicted RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 DAB1O75553 588 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 MOCS3O95396 460 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 GABRG2P18507 467 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 MESP2Q0VG99 397 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 MAP7D1Q3KQU3 841 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 KLHDC7AQ5VTJ3 777 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 CDKAL1Q5VV42 579 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 KIAA0907Q7Z7F0 614 aaPredicted RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 KDM1BQ8NB78 822 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 SLC39A13Q96H72 371 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 SLC2A13Q96QE2 648 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 PPP1R9BQ96SB3 815 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 LSM14BQ9BX40 385 aaKnown RBP15.4■□□□□ 0.06
SNX29-203ENST00000564111 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 PCED1AQ9H1Q7 454 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX29-203ENST00000564111 GGA2Q9UJY4 613 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 NUP205Q92621 2012 aa15.4■□□□□ 0.06
SNX29-203ENST00000564111 PAPSS1O43252 624 aaPredicted RBP15.39■□□□□ 0.05
SNX29-203ENST00000564111 MSI1O43347 362 aaKnown RBP15.39■□□□□ 0.05
SNX29-203ENST00000564111 GABBR2O75899 941 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 CAVIN2O95810 425 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 CDH5P33151 784 aaPredicted RBP15.39■□□□□ 0.05
SNX29-203ENST00000564111 MYL5Q02045 173 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 SLC12A1Q13621 1099 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 PIK3R6Q5UE93 754 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 IL31Q6EBC2 164 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 GJB7Q6PEY0 223 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 SFTPA1Q8IWL2 248 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 SCUBE3Q8IX30 993 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 FAM204AQ9H8W3 233 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 PLK2Q9NYY3 685 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 TJP2Q9UDY2 1190 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 CEP192Q8TEP8 1941 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 A0A1W2PQF6 199 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 KHNYNO15037 678 aaKnown RBP15.39■□□□□ 0.05
SNX29-203ENST00000564111 IGLV3-25P01717 112 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 PABPC1P11940 636 aaKnown RBP15.39■□□□□ 0.05
SNX29-203ENST00000564111 LMAN2Q12907 356 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 RABGAP1LQ5R372 815 aa15.39■□□□□ 0.05
SNX29-203ENST00000564111 LYSMD4Q5XG99 296 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms