RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 F8VP50 259 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 H7C4K7 107 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 ATP8B1O43520 1251 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 PRPSAP2O60256 369 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 ATP2C2O75185 946 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 DAB1O75553 588 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 HEXIM1O94992 359 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 TJP3O95049 919 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 LCP1P13796 627 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 VIPR2P41587 438 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 RNASE9P60153 205 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 YWHAZP63104 245 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 OGDHQ02218 1023 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 LMNB2Q03252 620 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 ADIGQ0VDE8 80 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 FZD5Q13467 585 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 CYP1B1Q16678 543 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 BOLA3Q53S33 107 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 TFDP3Q5H9I0 405 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 FBXO38Q6PIJ6 1188 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 STRADAQ7RTN6 431 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 ZNF687Q8N1G0 1237 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 EMC1Q8N766 993 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 ATAD1Q8NBU5 361 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 SHKBP1Q8TBC3 707 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 GRK7Q8WTQ7 553 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 TEKT4Q8WW24 435 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 RXFP2Q8WXD0 754 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 IRGQQ8WZA9 623 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 TSC1Q92574 1164 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 MYLPFQ96A32 169 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 LRRC1Q9BTT6 524 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 DDX23Q9BUQ8 820 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 AP1M1Q9BXS5 423 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 B3GNT5Q9BYG0 378 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 FRMD8P1Q9BZ68 369 aaPredicted RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 OSBPL8Q9BZF1 889 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 SMARCAL1Q9NZC9 954 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 TJP2Q9UDY2 1190 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 PCYOX1Q9UHG3 505 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 DPP7Q9UHL4 492 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 USP18Q9UMW8 372 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 SLC27A5Q9Y2P5 690 aa10.14□□□□□ -0.79
UBFD1-203ENST00000564106 UTP11Q9Y3A2 253 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 MRPS23Q9Y3D9 190 aaKnown RBP10.14□□□□□ -0.79
UBFD1-203ENST00000564106 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
UBFD1-203ENST00000564106 MTMR11A4FU01 709 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 TULP2O00295 520 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PRRG1O14668 218 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 MDM4O15151 490 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 XYLBO75191 536 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 GJB6O95452 261 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 GAS8O95995 478 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 NOS2P35228 1153 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 GJC1P36383 396 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 FLT3P36888 993 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 MATKP42679 507 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 TKTL1P51854 596 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 AIF1P55008 147 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 MAP3K7CLP57077 242 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 STARD6P59095 220 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 TAS2R40P59535 323 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 DR1Q01658 176 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 DUSP4Q13115 394 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 CUL1Q13616 776 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PDK2Q15119 407 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 TEAD2Q15562 447 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 RAB41Q5JT25 222 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 ELMSAN1Q6PJG2 1045 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 VITQ6UXI7 678 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 SYDE1Q6ZW31 735 aaPredicted RBP10.13□□□□□ -0.79
UBFD1-203ENST00000564106 LRRTM3Q86VH5 581 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PSTKQ8IV42 348 aaKnown RBP10.13□□□□□ -0.79
UBFD1-203ENST00000564106 KLHL7Q8IXQ5 586 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 TTC13Q8NBP0 860 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PJA1Q8NG27 643 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
UBFD1-203ENST00000564106 SLCO2A1Q92959 643 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 FAM149B1Q96BN6 582 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 SLITRK1Q96PX8 696 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PNKPQ96T60 521 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PKMYT1Q99640 499 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 PRRX2Q99811 253 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 FAM129AQ9BZQ8 928 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 ZCWPW1Q9H0M4 648 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 DDX47Q9H0S4 455 aaKnown RBP10.13□□□□□ -0.79
UBFD1-203ENST00000564106 LRRC19Q9H756 370 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 POPDC2Q9HBU9 364 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 HEBP1Q9NRV9 189 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 TMLHEQ9NVH6 421 aa10.13□□□□□ -0.79
UBFD1-203ENST00000564106 AFF4Q9UHB7 1163 aaKnown RBP10.13□□□□□ -0.79
UBFD1-203ENST00000564106 CEP250Q9BV73 2442 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 LRRD1A4D1F6 860 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms