RNA–Protein interactions for RNA: ENST00000563545.1

CHTF18-214, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 5

Gene CHTF18, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-214ENST00000563545 SORCS1Q8WY21 1168 aa23.23■■□□□ 1.31
CHTF18-214ENST00000563545 TFAP2BQ92481 460 aa23.23■■□□□ 1.31
CHTF18-214ENST00000563545 FOXJ1Q92949 421 aa23.23■■□□□ 1.31
CHTF18-214ENST00000563545 CEP63Q96MT8 703 aa23.23■■□□□ 1.31
CHTF18-214ENST00000563545 ABCC13Q9NSE7 274 aa23.23■■□□□ 1.31
CHTF18-214ENST00000563545 USP36Q9P275 1121 aaKnown RBP23.23■■□□□ 1.31
CHTF18-214ENST00000563545 UPK3BL1B0FP48 263 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 UPK3BL2E5RIL1 263 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 ARHGAP33O14559 1287 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 SYNCRIPO60506 623 aaKnown RBP23.22■■□□□ 1.31
CHTF18-214ENST00000563545 OPHN1O60890 802 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 LCP1P13796 627 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 SPINK2P20155 84 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 HOXD9P28356 352 aaPredicted RBP23.22■■□□□ 1.31
CHTF18-214ENST00000563545 DAOAP59103 153 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 CCDC40Q4G0X9 1142 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 TMEM215Q68D42 235 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 LCLAT1Q6UWP7 414 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 TMPRSS6Q8IU80 811 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 SCML4Q8N228 414 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 MINDY1Q8N5J2 469 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 OR2I1PQ8NGU4 316 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 TOE1Q96GM8 510 aaKnown RBP23.22■■□□□ 1.31
CHTF18-214ENST00000563545 DHTKD1Q96HY7 919 aaPredicted RBP23.22■■□□□ 1.31
CHTF18-214ENST00000563545 NT5C1BQ96P26 610 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 CNGB3Q9NQW8 809 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 ITM2CQ9NQX7 267 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 WSB2Q9NYS7 404 aaPredicted RBP23.22■■□□□ 1.31
CHTF18-214ENST00000563545 PCDHB4Q9Y5E5 795 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
CHTF18-214ENST00000563545 NUMA1Q14980 2115 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 MSI1O43347 362 aaKnown RBP23.21■■□□□ 1.31
CHTF18-214ENST00000563545 TOP3BO95985 862 aaKnown RBP23.21■■□□□ 1.31
CHTF18-214ENST00000563545 SYPP08247 313 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 PAEPP09466 180 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 CD44P16070 742 aaKnown RBP23.21■■□□□ 1.31
CHTF18-214ENST00000563545 PRKCHP24723 683 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 RGS7P49802 495 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 NUCB2P80303 420 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 WDR45BQ5MNZ6 344 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 SIPA1Q96FS4 1042 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 SUSD2Q9UGT4 822 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 STOML2Q9UJZ1 356 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 MAN1B1Q9UKM7 699 aa23.21■■□□□ 1.31
CHTF18-214ENST00000563545 KCNJ18B7U540 433 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 PMM2O15305 246 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 TIMM44O43615 452 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 GABBR2O75899 941 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 EPHX1P07099 455 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 PROS1P07225 676 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 NCAM1P13591 858 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 MAOBP27338 520 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 ARID5AQ03989 594 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 BECN1Q14457 450 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 PLEKHG6Q3KR16 790 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 PMF1Q6P1K2 205 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 PPM1KQ8N3J5 372 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 PRCCQ92733 491 aaPredicted RBP23.2■■□□□ 1.3
CHTF18-214ENST00000563545 KAT5Q92993 513 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 GPR174Q9BXC1 333 aa23.2■■□□□ 1.3
CHTF18-214ENST00000563545 SPAARA0A1B0GVQ0 90 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 MEI4A8MW99 385 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 C1QTNF9BB2RNN3 333 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 RNF225M0QZC1 329 aaPredicted RBP23.19■■□□□ 1.3
CHTF18-214ENST00000563545 PIK3R2O00459 728 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 LATS1O95835 1130 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 C1QTNF9P0C862 333 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 GNSP15586 552 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 PPP1R2P41236 205 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 TPMTP51580 245 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 COPAP53621 1224 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 ZNF445P59923 1031 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 CNGA2Q16280 664 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 ADGRF1Q5T601 910 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 KLHL10Q6JEL2 608 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 MSANTD2Q6P1R3 559 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 SERPINA13PQ6UXR4 307 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 UNQ6494/PRO21346Q6UXR6 183 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 SLC35F5Q8WV83 523 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 TMA16Q96EY4 203 aaKnown RBP23.19■■□□□ 1.3
CHTF18-214ENST00000563545 ZSWIM1Q9BR11 485 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 SCNM1Q9BWG6 230 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.19■■□□□ 1.3
CHTF18-214ENST00000563545 IGF2RP11717 2491 aa23.19■■□□□ 1.3
CHTF18-214ENST00000563545 KNL1Q8NG31 2342 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 M0QYV0 167 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 CALCAP01258 141 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 ACADMP11310 421 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 HLA-EP13747 358 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 BRD2P25440 801 aaKnown RBP23.18■■□□□ 1.3
CHTF18-214ENST00000563545 HLA-FP30511 346 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 SIM1P81133 766 aaPredicted RBP23.18■■□□□ 1.3
CHTF18-214ENST00000563545 TTI2Q6NXR4 508 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 CACUL1Q86Y37 369 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 ELOA2Q8IYF1 753 aaPredicted RBP23.18■■□□□ 1.3
CHTF18-214ENST00000563545 LMO3Q8TAP4 145 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 WFIKKN2Q8TEU8 576 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 IRGQQ8WZA9 623 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 ADAM33Q9BZ11 813 aa23.18■■□□□ 1.3
CHTF18-214ENST00000563545 DNAAF2Q9NVR5 837 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms