RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 SLC2A13Q96QE2 648 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 ASNSD1Q9NWL6 643 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 STARD13Q9Y3M8 1113 aa29.44■■■□□ 2.3
NME3-203ENST00000563367 IGLV3-25P01717 112 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 GLI1P08151 1106 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 CHRNB2P17787 502 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 PTMSP20962 102 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 SLC6A4P31645 630 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 SGSHP51688 502 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 CRY1Q16526 586 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 DCAF6Q58WW2 860 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 FAM133BQ5BKY9 247 aaKnown RBP29.43■■■□□ 2.3
NME3-203ENST00000563367 NUDT18Q6ZVK8 323 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 ZNF513Q8N8E2 541 aaPredicted RBP29.43■■■□□ 2.3
NME3-203ENST00000563367 SPAG5Q96R06 1193 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 SYNCQ9H7C4 482 aa29.43■■■□□ 2.3
NME3-203ENST00000563367 RTN4Q9NQC3 1192 aaKnown RBP29.43■■■□□ 2.3
NME3-203ENST00000563367 CCDC163A0A0D9SF12 145 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 ACSL4O60488 711 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 HSF2BPO75031 334 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 APBB3O95704 486 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 TRUB2O95900 331 aaKnown RBP29.42■■■□□ 2.3
NME3-203ENST00000563367 HOXD9P28356 352 aaPredicted RBP29.42■■■□□ 2.3
NME3-203ENST00000563367 SNX16P57768 344 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 SLC6A3Q01959 620 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 HSF5Q4G112 596 aaPredicted RBP29.42■■■□□ 2.3
NME3-203ENST00000563367 MPPE1Q53F39 396 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 EGFLAMQ63HQ2 1017 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 NADSYN1Q6IA69 706 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 RFWD3Q6PCD5 774 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 KCNV2Q8TDN2 545 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 IPO4Q8TEX9 1081 aaKnown RBP29.42■■■□□ 2.3
NME3-203ENST00000563367 AZIN2Q96A70 460 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 SMG5Q9UPR3 1016 aaKnown RBP29.42■■■□□ 2.3
NME3-203ENST00000563367 SLC27A6Q9Y2P4 619 aa29.42■■■□□ 2.3
NME3-203ENST00000563367 IRAK2O43187 625 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 CNR2P34972 360 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 STAT1P42224 750 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 SLC11A2P49281 568 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 EIF4EBP2Q13542 120 aaPredicted RBP29.41■■■□□ 2.3
NME3-203ENST00000563367 GEN1Q17RS7 908 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 TSTD1Q8NFU3 115 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 CPA5Q8WXQ8 436 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 TMA16Q96EY4 203 aaKnown RBP29.41■■■□□ 2.3
NME3-203ENST00000563367 ACOX2Q99424 681 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 CBX8Q9HC52 389 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 SDK1Q7Z5N4 2213 aa29.41■■■□□ 2.3
NME3-203ENST00000563367 LSM8O95777 96 aaKnown RBP29.4■■■□□ 2.3
NME3-203ENST00000563367 GABRB2P47870 512 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 NOMO3P69849 1222 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 FMO1Q01740 532 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 CDR2Q01850 454 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 LPAL2Q16609 132 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 C2CD6Q53TS8 623 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 ZC3H12AQ5D1E8 599 aaKnown RBP29.4■■■□□ 2.3
NME3-203ENST00000563367 EOGTQ5NDL2 527 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 PIK3R6Q5UE93 754 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 SLC26A9Q7LBE3 791 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 ERICH1Q86X53 443 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 ZNF677Q86XU0 584 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 C18orf8Q96DM3 657 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 MYEOVQ96EZ4 313 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 EBF1Q9UH73 591 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 XPO7Q9UIA9 1087 aaKnown RBP29.4■■■□□ 2.3
NME3-203ENST00000563367 CFAP54Q96N23 3096 aa29.4■■■□□ 2.3
NME3-203ENST00000563367 AXIN1O15169 862 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 DGKEP52429 567 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 ZNF445P59923 1031 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 SIM2Q14190 667 aaPredicted RBP29.39■■■□□ 2.3
NME3-203ENST00000563367 NAA35Q5VZE5 725 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 ZDHHC17Q8IUH5 632 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 ZNF397Q8NF99 534 aaPredicted RBP29.39■■■□□ 2.3
NME3-203ENST00000563367 SLC2A11Q9BYW1 496 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 ZNF292O60281 2723 aa29.39■■■□□ 2.3
NME3-203ENST00000563367 GVINP1Q7Z2Y8 2422 aa29.39■■■□□ 2.29
NME3-203ENST00000563367 RALGAPA1Q6GYQ0 2036 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 DAB1O75553 588 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 MOCS2O96007 188 aaPredicted RBP29.38■■■□□ 2.29
NME3-203ENST00000563367 WASP42768 502 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 CDK17Q00537 523 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 ZSCAN23Q3MJ62 389 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 PRR23BQ6ZRT6 265 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 LUZP1Q86V48 1076 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 XYLT1Q86Y38 959 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 DCLK2Q8N568 766 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 GAB3Q8WWW8 586 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 NAP1L5Q96NT1 182 aaPredicted RBP29.38■■■□□ 2.29
NME3-203ENST00000563367 NUCKS1Q9H1E3 243 aaKnown RBP29.38■■■□□ 2.29
NME3-203ENST00000563367 FAM204AQ9H8W3 233 aa29.38■■■□□ 2.29
NME3-203ENST00000563367 SYNJ2BP-COX16A0A087WUM0 186 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 CYP1A1P04798 512 aaPredicted RBP29.37■■■□□ 2.29
NME3-203ENST00000563367 NTSR1P30989 418 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 ARID5AQ03989 594 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 ANO7Q6IWH7 933 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 TRMT11Q7Z4G4 463 aaKnown RBP29.37■■■□□ 2.29
NME3-203ENST00000563367 RASSF3Q86WH2 238 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 PRICKLE1Q96MT3 831 aaPredicted RBP29.37■■■□□ 2.29
NME3-203ENST00000563367 DDIT4Q9NX09 232 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 COX16Q9P0S2 106 aa29.37■■■□□ 2.29
NME3-203ENST00000563367 ABCA7Q8IZY2 2146 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms