RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SPATA13Q96N96 652 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 CSPG4P5Q96PW8 444 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 NR1H4Q96RI1 486 aaPredicted RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 ZNF184Q99676 751 aaPredicted RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 MROH8Q9H579 483 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 DDX43Q9NXZ2 648 aaKnown RBP13.5□□□□□ -0.25
USB1-207ENST00000563149 SCOCQ9UIL1 159 aa13.5□□□□□ -0.25
USB1-207ENST00000563149 CCDC195A0A1B0GUA6 201 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 KIF3CO14782 793 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 TSPAN1O60635 241 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 STK10O94804 968 aaKnown RBP13.49□□□□□ -0.25
USB1-207ENST00000563149 LGALS2P05162 132 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 ANPEPP15144 967 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 CALRP27797 417 aaKnown RBP13.49□□□□□ -0.25
USB1-207ENST00000563149 ARL4AP40617 200 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 BAG6P46379 1132 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 CPA2P48052 419 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 IGBP1P78318 339 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 MXRA7P84157 204 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 GBE1Q04446 702 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 BST2Q10589 180 aaKnown RBP13.49□□□□□ -0.25
USB1-207ENST00000563149 RCN2Q14257 317 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 MBLAC2Q68D91 279 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 NCBP2-AS2Q69YL0 99 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 PACS1Q6VY07 963 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 OLFM3Q96PB7 478 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 KCTD15Q96SI1 283 aaPredicted RBP13.49□□□□□ -0.25
USB1-207ENST00000563149 SYT15Q9BQS2 421 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 MRPL45Q9BRJ2 306 aaKnown RBP13.49□□□□□ -0.25
USB1-207ENST00000563149 DTLQ9NZJ0 730 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 SOX13Q9UN79 622 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 APOBEC2Q9Y235 224 aaKnown RBP13.49□□□□□ -0.25
USB1-207ENST00000563149 PAPPA2Q9BXP8 1791 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 EVPLQ92817 2033 aa13.49□□□□□ -0.25
USB1-207ENST00000563149 AHCYL1O43865 530 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 PLIN3O60664 434 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 OPHN1O60890 802 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 GSRP00390 522 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 SERPINE1P05121 402 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 KITP10721 976 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 PGAM1P18669 254 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 AMPD1P23109 780 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 SP100P23497 879 aaPredicted RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 GARSP41250 739 aaKnown RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 SLC1A6P48664 564 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 BCAT1P54687 386 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ALDH18A1P54886 795 aaKnown RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 ARHGAP1Q07960 439 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 TEDDM1Q5T9Z0 273 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 RIPOR1Q6ZS17 1223 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ANKRD52Q8NB46 1076 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 DTX3LQ8TDB6 740 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 HSFY1Q96LI6 401 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 THTPAQ9BU02 230 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 C20orf27Q9GZN8 174 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 KRT82Q9NSB4 513 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 DNAJC28Q9NX36 388 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 SNX9Q9Y5X1 595 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 USP3Q9Y6I4 520 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 RALGAPA2Q2PPJ7 1873 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 SF3B1O75533 1304 aaKnown RBP eCLIP13.48□□□□□ -0.25
USB1-207ENST00000563149 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 PRR5-ARHGAP8B1AHC4 643 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 GABBR2O75899 941 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 MAP3K6O95382 1288 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 FESP07332 822 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 FGF3P11487 239 aaPredicted RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 GLUD2P49448 558 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 CCNHP51946 323 aaPredicted RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 ARHGAP8P85298 464 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 KDSRQ06136 332 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 TUBB3Q13509 450 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ZBTB6Q15916 424 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 EFHC1Q5JVL4 640 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 MTHFD1LQ6UB35 978 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 COLGALT1Q8NBJ5 622 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 PPP4R1Q8TF05 950 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 NLRP7Q8WX94 980 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 GATA6Q92908 595 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 PANX3Q96QZ0 392 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ZNF395Q9H8N7 513 aaPredicted RBP13.48□□□□□ -0.25
USB1-207ENST00000563149 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.48□□□□□ -0.25
USB1-207ENST00000563149 RBPJLQ9UBG7 517 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 SLC7A8Q9UHI5 535 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 EMCNQ9ULC0 261 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 DNAJC16Q9Y2G8 782 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 ASB3Q9Y575 518 aa13.48□□□□□ -0.25
USB1-207ENST00000563149 CITO14578 2027 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 VTNP04004 478 aa13.47□□□□□ -0.25
USB1-207ENST00000563149 ALOX15P16050 662 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms