RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TSTD1Q8NFU3 115 aa16.78■□□□□ 0.28
COMMD4-206ENST00000562610 P2RY11Q96G91 374 aa16.78■□□□□ 0.28
COMMD4-206ENST00000562610 RTN4Q9NQC3 1192 aaKnown RBP16.78■□□□□ 0.28
COMMD4-206ENST00000562610 ASNSD1Q9NWL6 643 aa16.78■□□□□ 0.28
COMMD4-206ENST00000562610 USP34Q70CQ2 3546 aa16.78■□□□□ 0.28
COMMD4-206ENST00000562610 MUC22E2RYF6 1773 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 CEP192Q8TEP8 1941 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 PLXND1Q9Y4D7 1925 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 GOLGA6L19H0YKK7 550 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 ACSL4O60488 711 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 LILRB5O75023 590 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 KIR2DL1P43626 348 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 NOMO3P69849 1222 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 PITX1P78337 314 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 CDK17Q00537 523 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 CDR2Q01850 454 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 C2CD6Q53TS8 623 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 FAM102AQ5T9C2 384 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 TRMT11Q7Z4G4 463 aaKnown RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 ZDHHC17Q8IUH5 632 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 IL17RCQ8NAC3 791 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 TXNDC5Q8NBS9 432 aaKnown RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 CPA5Q8WXQ8 436 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 SLC2A13Q96QE2 648 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 HINFPQ9BQA5 517 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 SEPT11Q9NVA2 429 aaKnown RBP16.77■□□□□ 0.28
COMMD4-206ENST00000562610 DDIT4Q9NX09 232 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 STOML2Q9UJZ1 356 aa16.77■□□□□ 0.28
COMMD4-206ENST00000562610 CKAP5Q14008 2032 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 A0A0A0MRY4 1105 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 TYW5A2RUC4 315 aaKnown RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 GOLGA8SH3BPF8 625 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 SGK1O00141 431 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 APBB3O95704 486 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 CAVIN2O95810 425 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 HOXD9P28356 352 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 SLC6A4P31645 630 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 GBP1P32455 592 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 RNASE9P60153 205 aaKnown RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 FMO1Q01740 532 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 SRSF5Q13243 272 aaKnown RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 HSF5Q4G112 596 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 FAM133BQ5BKY9 247 aaKnown RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 EOGTQ5NDL2 527 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 EGFLAMQ63HQ2 1017 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 PRR23BQ6ZRT6 265 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 CAMKK1Q8N5S9 505 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 RNF34Q969K3 372 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 SLC39A13Q96H72 371 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 DDX50Q9BQ39 737 aaKnown RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 EPC1Q9H2F5 836 aa16.76■□□□□ 0.27
COMMD4-206ENST00000562610 SMG5Q9UPR3 1016 aaKnown RBP16.76■□□□□ 0.27
COMMD4-206ENST00000562610 THADAQ6YHU6 1953 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 A0A1B0GTH6 734 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 PRRT4C9JH25 899 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 TBL1XO60907 577 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 IGLV3-25P01717 112 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 CISD3P0C7P0 127 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 CHRNB2P17787 502 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 HOXA6P31267 233 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 WASP42768 502 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 GABRB2P47870 512 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 SGSHP51688 502 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 NME3Q13232 169 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 CRY1Q16526 586 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 LPAL2Q16609 132 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 ZC3H12AQ5D1E8 599 aaKnown RBP16.75■□□□□ 0.27
COMMD4-206ENST00000562610 NADSYN1Q6IA69 706 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 ANO7Q6IWH7 933 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 TRIM72Q6ZMU5 477 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 MMS22LQ6ZRQ5 1243 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 ANKS1BQ7Z6G8 1248 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 WDR5BQ86VZ2 330 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 XYLT1Q86Y38 959 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 CHPFQ8IZ52 775 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 HJURPQ8NCD3 748 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-206ENST00000562610 ZNF397Q8NF99 534 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-206ENST00000562610 TMA16Q96EY4 203 aaKnown RBP16.75■□□□□ 0.27
COMMD4-206ENST00000562610 NAP1L5Q96NT1 182 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-206ENST00000562610 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
COMMD4-206ENST00000562610 RAB23Q9ULC3 237 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 CLEC4EQ9ULY5 219 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 STAP1Q9ULZ2 295 aa16.75■□□□□ 0.27
COMMD4-206ENST00000562610 AXIN1O15169 862 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 CHRM1P11229 460 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 HOXB2P14652 356 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 FERP16591 822 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 NOS2P35228 1153 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 MATKP42679 507 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SULT1E1P49888 294 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 DGKEP52429 567 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 FANCCQ00597 558 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SIM2Q14190 667 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 GEN1Q17RS7 908 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 TMEM92Q6UXU6 159 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 CEP68Q76N32 757 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms