RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 NR2C2P49116 596 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 SLC18A1P54219 525 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 GDF10P55107 478 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 LILRA4P59901 499 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 IFT88Q13099 833 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 CBLBQ13191 982 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 CCDC121Q6ZUS5 278 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 MRPL10Q7Z7H8 261 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 PLD5Q8N7P1 536 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 MAML1Q92585 1016 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 PGBD4Q96DM1 585 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 PIWIL1Q96J94 861 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 CASD1Q96PB1 797 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 GAD1Q99259 594 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 DPEP3Q9H4B8 488 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 PCDH18Q9HCL0 1135 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 EURLQ9NYK6 297 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 XPO7Q9UIA9 1087 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 NME7Q9Y5B8 376 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 NLRC5Q86WI3 1866 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 TDRD15B5MCY1 1934 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 BCLAF3A2AJT9 711 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 ARL5CA6NH57 179 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 RASA4BC9J798 803 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 XPO1O14980 1071 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 SPTLC1O15269 473 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 RASA4O43374 803 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 POMCP01189 267 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 IL4RP24394 825 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 ADORA2BP29275 332 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 PPARDQ03181 441 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 KLHL38Q2WGJ6 581 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 SLC9A4Q6AI14 798 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 VSTM1Q6UX27 236 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 BZW1Q7L1Q6 419 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 STRADAQ7RTN6 431 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 PALM2Q8IXS6 379 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 FIBCD1Q8N539 461 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 FAF2Q96CS3 445 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 RTP4Q96DX8 246 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 HNRNPABQ99729 332 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 ZNF576Q9H609 170 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 CTNNAL1Q9UBT7 734 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 TBK1Q9UHD2 729 aa12.03□□□□□ -0.48
PCAT1-202ENST00000561978 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
PCAT1-202ENST00000561978 CHADO15335 359 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 LCP1P13796 627 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 CCDC130P13994 396 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 LMO2P25791 158 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 PBX3P40426 434 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 HDAC4P56524 1084 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 GEMIN4P57678 1058 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 BASP1P80723 227 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 XRCC4Q13426 336 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 ITIH4Q14624 930 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 DPYSL2Q16555 572 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 QPCTQ16769 361 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 ZC3H12AQ5D1E8 599 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 RNF187Q5TA31 235 aaPredicted RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 GLB1LQ6UWU2 654 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 ZC3H18Q86VM9 953 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 PSTKQ8IV42 348 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 B3GALNT2Q8NCR0 500 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 SLC2A14Q8TDB8 520 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 ARNTL2Q8WYA1 636 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 C11orf84Q9BUA3 381 aaPredicted RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 SNRNP25Q9BV90 132 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 DUSP16Q9BY84 665 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 B3GNT5Q9BYG0 378 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 PSMC3IPQ9P2W1 217 aaPredicted RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 SMG5Q9UPR3 1016 aaKnown RBP12.02□□□□□ -0.49
PCAT1-202ENST00000561978 KIAA1671Q9BY89 1806 aa12.02□□□□□ -0.49
PCAT1-202ENST00000561978 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 GOLGA8MH3BSY2 632 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 CYB561D2O14569 222 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 HOXA2O43364 376 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 SPAG6O75602 509 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 LINC00271P0C7V0 271 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 FASTKD3Q14CZ7 662 aaKnown RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 TMED2Q15363 201 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 ZRSR2Q15696 482 aaKnown RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 SPOUT1Q5T280 376 aaKnown RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 ZNF697Q5TEC3 545 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 C1orf228Q6PIY5 440 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 NPNTQ6UXI9 565 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 C3orf62Q6ZUJ4 267 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 CDKL3Q8IVW4 592 aaPredicted RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 LRRC34Q8IZ02 419 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms