RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 BNC1Q01954 994 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 PDE4CQ08493 712 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 TRIP4Q15650 581 aaPredicted RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 HLA-BQ31612 363 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 MPPE1Q53F39 396 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 TMEM215Q68D42 235 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 KRT39Q6A163 491 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 PM20D1Q6GTS8 502 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 SERPINA13PQ6UXR4 307 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 RSRC2Q7L4I2 434 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 FAM186BQ8IYM0 893 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 ANKRD52Q8NB46 1076 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 SLC4A11Q8NBS3 891 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 OR2T3Q8NH03 318 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 SETD7Q8WTS6 366 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 DDI1Q8WTU0 396 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 TMEM176AQ96HP8 235 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 CDC6Q99741 560 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 CIPCQ9C0C6 399 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 CCDC86Q9H6F5 360 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 IL21RQ9HBE5 538 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 HPSEQ9Y251 543 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 ZZEF1O43149 2961 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 SPEGQ15772 3267 aa12.38□□□□□ -0.43
CARMIL3-204ENST00000561354 PLXNB3Q9ULL4 1909 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 ZFYVE26Q68DK2 2539 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 FLRT2O43155 660 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 DKK1O94907 266 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 TKTL1P51854 596 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 SLC8A3P57103 927 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 ARID5AQ03989 594 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 ADAM9Q13443 819 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 TMPRSS7Q7RTY8 843 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 GUF1Q8N442 669 aaKnown RBP12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 SORCS1Q8WY21 1168 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 TMEM245Q9H330 911 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 MMRN2Q9H8L6 949 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 OSGEPQ9NPF4 335 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 CISHQ9NSE2 258 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 OLA1Q9NTK5 396 aaKnown RBP12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 STOML2Q9UJZ1 356 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 FNDC3AQ9Y2H6 1198 aaKnown RBP12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 BAHCC1Q9P281 2608 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
CARMIL3-204ENST00000561354 FAM237AA0A1B0GTK4 181 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 LATS1O95835 1130 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 ZBED1O96006 694 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 HOXD9P28356 352 aaPredicted RBP12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 HLA-FP30511 346 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 SUZ12Q15022 739 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 ZCWPW2Q504Y3 356 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 BHLHA9Q7RTU4 235 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 FBXL13Q8NEE6 735 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 RHBDD1Q8TEB9 315 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 WFIKKN2Q8TEU8 576 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 ARID3AQ99856 593 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 LHX5Q9H2C1 402 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 FBRSQ9HAH7 460 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 RAB20Q9NX57 234 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 TOR4AQ9NXH8 423 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 CHMP5Q9NZZ3 219 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 DKK4Q9UBT3 224 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 PLA2G4CQ9UP65 541 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 MAPK8IP1Q9UQF2 711 aa12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.36□□□□□ -0.43
CARMIL3-204ENST00000561354 A0A1B0GVT2 93 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 STX10O60499 249 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 HSP90AA1P07900 732 aaKnown RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 HLA-EP13747 358 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 ACSL1P33121 698 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 SYKP43405 635 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 GRIA4P48058 902 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 CSNK1EP49674 416 aaKnown RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 MXI1P50539 228 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 ZBTB16Q05516 673 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 DPYDQ12882 1025 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 PKP1Q13835 747 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 TEAD4Q15561 434 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 PTPRNQ16849 979 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 EDRF1Q3B7T1 1238 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 ADGRF1Q5T601 910 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 KIAA0907Q7Z7F0 614 aaPredicted RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 ADIPOR2Q86V24 386 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 FAM124AQ86V42 546 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 CACUL1Q86Y37 369 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms