RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 TRBC2A0A5B9 178 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SH3D21A4FU49 640 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ERICH4A6NGS2 130 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 NPIPB15A6NHN6 443 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 GLOD5A6NK44 160 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 BTBD18B2RXH4 712 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 KCNJ18B7U540 433 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 C9orf172C9J069 976 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 C11orf95C9JLR9 678 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 FAM229AH3BQW9 127 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CAPN9O14815 690 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 OIP5O43482 229 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ADAM20O43506 726 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HS6ST1O60243 411 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ENTPD3O75355 529 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SLC43A1O75387 559 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GPC4O75487 556 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 RPP40O75818 363 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 CYP7B1O75881 506 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 IPO7O95373 1038 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 MPIG6BO95866 241 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 POMCP01189 267 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 AMHP03971 560 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PROCP04070 461 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CYBBP04839 570 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HMOX1P09601 288 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 IRF1P10914 325 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 KRT5P13647 590 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 RPS2P15880 293 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 GJA1P17302 382 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HK1P19367 917 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 DRD1P21728 446 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PTAFRP25105 342 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 POU1F1P28069 291 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PCSK1P29120 753 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TTKP33981 857 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 THBS4P35443 961 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PNPLA4P41247 253 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CD86P42081 329 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MTHFRP42898 656 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MAGEA10P43363 369 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 ALDH1A3P47895 512 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PIP4K2AP48426 406 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 IFNAR2P48551 515 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PXNP49023 591 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 CDK7P50613 346 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 RAB28P51157 221 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HSD17B4P51659 736 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TKTL1P51854 596 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PGDP52209 483 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PPP5CP53041 499 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 RCAN1P53805 252 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 EPHB3P54753 998 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 OLR1P78380 273 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MVKQ03426 396 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SRSF11Q05519 484 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 ACTN3Q08043 901 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 PTP4A2Q12974 167 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GAS6Q14393 721 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 KCNJ12Q14500 433 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 NR1I3Q14994 352 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 WDR43Q15061 677 aaKnown RBP eCLIP2.15□□□□□ -2.07
RTF1-207ENST00000561076 RABEP1Q15276 862 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TBCCQ15814 346 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 INAQ16352 499 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GPR162Q16538 588 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GSTA3Q16772 222 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ALG11Q2TAA5 492 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GAB4Q2WGN9 574 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 LRRC24Q50LG9 513 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 IGSF11Q5DX21 431 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 DCAF17Q5H9S7 520 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 CRB2Q5IJ48 1285 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GLRA4Q5JXX5 417 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SPOUT1Q5T280 376 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 UTP14CQ5TAP6 766 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 SFMBT2Q5VUG0 894 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 AFMIDQ63HM1 303 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 KLHL10Q6JEL2 608 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TAF2Q6P1X5 1199 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MTFR2Q6P444 385 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 WDR73Q6P4I2 378 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 DRICH1Q6PGQ1 229 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 SLC2A7Q6PXP3 512 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PAQR3Q6TCH7 311 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TEPPQ6URK8 271 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SEZ6L2Q6UXD5 910 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CLEC9AQ6UXN8 241 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CD300LDQ6UXZ3 194 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ETV3LQ6ZN32 361 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ZNF574Q6ZN55 896 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 RGS9BPQ6ZS82 235 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PIK3AP1Q6ZUJ8 805 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ERN2Q76MJ5 926 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 PPP1R42Q7Z4L9 355 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SPATA21Q7Z572 469 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ZAR1Q86SH2 424 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ADGRA1Q86SQ6 560 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MIB1Q86YT6 1006 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MFN1Q8IWA4 741 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms