RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	SYCP2L	Q5T4T6	812 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	SERPINA13P	Q6UXR4	307 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	ARHGAP18	Q8N392	663 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	ZNF276	Q8N554	614 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	PNPLA1	Q8N8W4	532 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	UCMA	Q8WVF2	138 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	KAT5	Q92993	513 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	SIPA1	Q96FS4	1042 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	IPO9	Q96P70	1041 aa	Known RBP	14	□□□□□ -0.17
PSME1-208	ENST00000561059	IL21R	Q9HBE5	538 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	ITM2C	Q9NQX7	267 aa		14	□□□□□ -0.17
PSME1-208	ENST00000561059	WSB2	Q9NYS7	404 aa	Predicted RBP	14	□□□□□ -0.17
PSME1-208	ENST00000561059	GOLGA6L7	A0A1B0GV03	622 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	GABBR2	O75899	941 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	SYP	P08247	313 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	HOXD9	P28356	352 aa	Predicted RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	HLA-F	P30511	346 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	ARID5A	Q03989	594 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	BST2	Q10589	180 aa	Known RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	TRIP4	Q15650	581 aa	Predicted RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	DCAF12L1	Q5VU92	463 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	BSPRY	Q5W0U4	402 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	PM20D1	Q6GTS8	502 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	RFWD3	Q6PCD5	774 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	SIX6OS1	Q8N1H7	587 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	RNF139	Q8WU17	664 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	TFAP2B	Q92481	460 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	SNX19	Q92543	992 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	PRCC	Q92733	491 aa	Predicted RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	FOXJ1	Q92949	421 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	PLD4	Q96BZ4	506 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	TSG101	Q99816	390 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	UBXN6	Q9BZV1	441 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	ABCB8	Q9NUT2	735 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	USP36	Q9P275	1121 aa	Known RBP	13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	HESX1	Q9UBX0	185 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	CEP192	Q8TEP8	1941 aa		13.99	□□□□□ -0.17
PSME1-208	ENST00000561059	RNF225	M0QZC1	329 aa	Predicted RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059		O00370	1275 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	SLC16A3	O15427	465 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	GNS	P15586	552 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	BRD2	P25440	801 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	HARS2	P49590	506 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	MCCD1	P59942	119 aa	Predicted RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ENPP2	Q13822	863 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	FNDC3B	Q53EP0	1204 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	WDR45B	Q5MNZ6	344 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	TMEM270	Q6UE05	265 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	RABEPK	Q7Z6M1	372 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	FAM217A	Q8IXS0	508 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	CPXM2	Q8N436	756 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	TTC39C	Q8N584	583 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	UBR7	Q8N806	425 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	KDF1	Q8NAX2	398 aa	Predicted RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	WFDC5	Q8TCV5	224 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	CLEC4C	Q8WTT0	213 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	SLC35C1	Q96A29	364 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ZSWIM1	Q9BR11	485 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	MTG2	Q9H4K7	406 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	DNAAF2	Q9NVR5	837 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	RMND1	Q9NWS8	449 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	EIF2B4	Q9UI10	523 aa	Known RBP	13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	ATP6V1D	Q9Y5K8	247 aa		13.98	□□□□□ -0.17
PSME1-208	ENST00000561059	UPK3BL1	B0FP48	263 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	UPK3BL2	E5RIL1	263 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	GJB3	O75712	270 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	ACADM	P11310	421 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	CD44	P16070	742 aa	Known RBP	13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	DAOA	P59103	153 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	FKBP3	Q00688	224 aa	Known RBP	13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	BNC1	Q01954	994 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	MPPE1	Q53F39	396 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	KLHL10	Q6JEL2	608 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	PMF1	Q6P1K2	205 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	LAYN	Q6UX15	382 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	CHST9	Q7L1S5	443 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	NAXD	Q8IW45	347 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	TMA16	Q96EY4	203 aa	Known RBP	13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	MYEOV	Q96EZ4	313 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	STIM2	Q9P246	746 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	SUSD2	Q9UGT4	822 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	COQ4	Q9Y3A0	265 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	PCDHB4	Q9Y5E5	795 aa		13.97	□□□□□ -0.17
PSME1-208	ENST00000561059	FAM208B	Q5VWN6	2430 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059		A0A1B0GTW7	788 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	SRRM3	A6NNA2	597 aa	Predicted RBP	13.96	□□□□□ -0.17
PSME1-208	ENST00000561059		M0QYV0	167 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	TBL1X	O60907	577 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	VDR	P11473	427 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	CD70	P32970	193 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	ACSL1	P33121	698 aa		13.96	□□□□□ -0.17
PSME1-208	ENST00000561059	FMO5	P49326	533 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms