RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 LMNB2Q03252 620 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 NAB1Q13506 487 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 LAMB3Q13751 1172 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 HOOK3Q86VS8 718 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 SH2D3CQ8N5H7 860 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 STKLD1Q8NE28 680 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 OR10T2Q8NGX3 314 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 FCRL2Q96LA5 508 aaPredicted RBP5.64□□□□□ -1.51
ZEB1-219ENST00000560721 LYSMD1Q96S90 227 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 GAD1Q99259 594 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 ACE2Q9BYF1 805 aaPredicted RBP5.64□□□□□ -1.51
ZEB1-219ENST00000560721 KLC2Q9H0B6 622 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 ARNT2Q9HBZ2 717 aa5.64□□□□□ -1.51
ZEB1-219ENST00000560721 STK10O94804 968 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 GSRP00390 522 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 EPOP01588 193 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 MLNP12872 115 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 RDXP35241 583 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 RFC1P35251 1148 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 LIG3P49916 1009 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CYP2J2P51589 502 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 COPAP53621 1224 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CAV1Q03135 178 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ZNF844Q08AG5 666 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 SIM2Q14190 667 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TRADDQ15628 312 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 INO80DQ53TQ3 878 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 WLSQ5T9L3 541 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 KLHDC8AQ8IYD2 350 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TNS4Q8IZW8 715 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ARFGAP2Q8N6H7 521 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TPCN2Q8NHX9 752 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 P3H4Q92791 437 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TLCD1Q96CP7 247 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CABS1Q96KC9 395 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 FAM193BQ96PV7 902 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 KRT12Q99456 494 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 MRPL45Q9BRJ2 306 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PACSIN1Q9BY11 444 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PBX4Q9BYU1 374 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CD248Q9HCU0 757 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 DKK3Q9UBP4 350 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 STAP1Q9ULZ2 295 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PLAAQ9Y263 795 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ATP11BQ9Y2G3 1177 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 YBX2Q9Y2T7 364 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TICRRQ7Z2Z1 1910 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CHADO15335 359 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 FYNP06241 537 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 USP17L7P0C7H9 530 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PCSK2P16519 638 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 SSTR3P32745 418 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 MATR3P43243 847 aaKnown RBP eCLIP5.63□□□□□ -1.513e-6■■■□□ 19
ZEB1-219ENST00000560721 POLR2FP61218 127 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 DEFB103AP81534 67 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ROR1Q01973 937 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 MTMR3Q13615 1198 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 BYSLQ13895 437 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 RAPGEF1Q13905 1077 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PRKD1Q15139 912 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TNFAIP8L3Q5GJ75 292 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 LCA5Q86VQ0 697 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CBARPQ8N350 705 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CLDN23Q96B33 292 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TIFAQ96CG3 184 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 LRRC45Q96CN5 670 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PCDHB18PQ96TA0 734 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 KIFC3Q9BVG8 833 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 UBE2TQ9NPD8 197 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 DDX43Q9NXZ2 648 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ADAMTS1Q9UHI8 967 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 OR51B4Q9Y5P0 310 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TET1Q8NFU7 2136 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ESYT3A0FGR9 886 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 FAM187AA6NFU0 413 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 MYO1FO00160 1098 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TCEA3O75764 348 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 FTCDO95954 541 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ITGAVP06756 1048 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 FLT3P36888 993 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 STARD6P59095 220 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 IRX1P78414 480 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 KLHL30Q0D2K2 578 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CLPPQ16740 277 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PARP15Q460N3 678 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 FBXW10Q5XX13 1052 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 BBS12Q6ZW61 710 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 TMC3Q7Z5M5 1100 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 NT5DC3Q86UY8 548 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 LMNTD2Q8IXW0 634 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 ABI1Q8IZP0 508 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 MYLPFQ96A32 169 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CYFIP2Q96F07 1278 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 BTN2A3PQ96KV6 586 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 PSMB7Q99436 277 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 HINFPQ9BQA5 517 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CPEB1Q9BZB8 566 aaKnown RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 NEUROG2Q9H2A3 272 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms