RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FYB2Q5VWT5 728 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 KIAA1211LQ6NV74 962 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 RSRC2Q7L4I2 434 aaKnown RBP14.2□□□□□ -0.14
SMAD3-214ENST00000560402 TMC6Q7Z403 805 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 ANKS1BQ7Z6G8 1248 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 PIGZQ86VD9 579 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 ANKRD52Q8NB46 1076 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 SLC4A11Q8NBS3 891 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 CCDC112Q8NEF3 446 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 HSPA12BQ96MM6 686 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 ACOX2Q99424 681 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 TSG101Q99816 390 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 RRAGDQ9NQL2 400 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-214ENST00000560402 CACNA2D2Q9NY47 1150 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 MARCH2Q9P0N8 246 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 CYP8B1Q9UNU6 501 aa14.2□□□□□ -0.14
SMAD3-214ENST00000560402 MUC22E2RYF6 1773 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 TMEM8BA6NDV4 472 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 XPO1O14980 1071 aaKnown RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 NDUFS2O75306 463 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 SYPP08247 313 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 ZNF18P17022 549 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 RAD23BP54727 409 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 MFAP3P55082 362 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 YWHAGP61981 247 aaKnown RBP eCLIP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 BST2Q10589 180 aaKnown RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 EFEMP1Q12805 493 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 SEMA3BQ13214 749 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 ENPP2Q13822 863 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 HNRNPDQ14103 355 aaKnown RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 SYCP2LQ5T4T6 812 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 PM20D1Q6GTS8 502 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 KIAA1324Q6UXG2 1013 aaKnown RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 UNQ6494/PRO21346Q6UXR6 183 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 PIP4P1Q86T03 277 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 FAM217AQ8IXS0 508 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 ZC3H3Q8IXZ2 948 aaKnown RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 DEFB124Q8NES8 71 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 SEMA4DQ92854 862 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 BHMTQ93088 406 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 MRGPRX1Q96LB2 322 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 SLC2A11Q9BYW1 496 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 THAP10Q9P2Z0 257 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-214ENST00000560402 HESX1Q9UBX0 185 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 WASF3Q9UPY6 502 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 COQ4Q9Y3A0 265 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 STON1Q9Y6Q2 735 aa14.19□□□□□ -0.14
SMAD3-214ENST00000560402 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 FRYQ5TBA9 3013 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 OPHN1O60890 802 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 LATS1O95835 1130 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 ZBED1O96006 694 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 KLKB1P03952 638 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 ATP1A3P13637 1013 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 TBXAS1P24557 533 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 FKBP3Q00688 224 aaKnown RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 LRRC63Q05C16 580 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 CUL2Q13617 745 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 SGO2Q562F6 1265 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 DCAF17Q5H9S7 520 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 WDR45BQ5MNZ6 344 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 TCERG1LQ5VWI1 586 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 SLC41A1Q8IVJ1 513 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 ZNF419Q96HQ0 510 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 ARID3AQ99856 593 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 THAP9Q9H5L6 903 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 PLK2Q9NYY3 685 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 USP36Q9P275 1121 aaKnown RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 TSPAN16Q9UKR8 245 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 AGO1Q9UL18 857 aaKnown RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 HBS1LQ9Y450 684 aaKnown RBP14.18□□□□□ -0.14
SMAD3-214ENST00000560402 RAD54BQ9Y620 910 aa14.18□□□□□ -0.14
SMAD3-214ENST00000560402 SLC12A8A0AV02 714 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 ARHGAP33O14559 1287 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CCP110O43303 1012 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 HMBSP08397 361 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 SETSIPP0DME0 302 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 GNSP15586 552 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
SMAD3-214ENST00000560402 EEF1GP26641 437 aaKnown RBP14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CD6P30203 668 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 PRCPP42785 496 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 TKTL1P51854 596 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 STX17P56962 302 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 SLC14A1Q13336 389 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 TRIP4Q15650 581 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-214ENST00000560402 GEN1Q17RS7 908 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 GOLGA7BQ2TAP0 167 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 FUT11Q495W5 492 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CBWD6Q4V339 395 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CBWD3Q5JTY5 395 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CBWD5Q5RIA9 395 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 CDKAL1Q5VV42 579 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 VSTM4Q8IW00 320 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-214ENST00000560402 SCML4Q8N228 414 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 MINDY1Q8N5J2 469 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 PIWIL1Q96J94 861 aaKnown RBP14.17□□□□□ -0.14
SMAD3-214ENST00000560402 GTPBP2Q9BX10 602 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms