RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.27■■□□□ 1.48
CRNDE-209ENST00000560208 FHOD1Q9Y613 1164 aa24.27■■□□□ 1.48
CRNDE-209ENST00000560208 CEP192Q8TEP8 1941 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 GOLGA6L19H0YKK7 550 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 M0QYV0 167 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 RGS7P49802 495 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 KLHDC7AQ5VTJ3 777 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 PMF1Q6P1K2 205 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 APTXQ7Z2E3 356 aaKnown RBP24.26■■□□□ 1.47
CRNDE-209ENST00000560208 FMNL3Q8IVF7 1028 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 ABCC13Q9NSE7 274 aa24.26■■□□□ 1.47
CRNDE-209ENST00000560208 HBS1LQ9Y450 684 aaKnown RBP24.26■■□□□ 1.47
CRNDE-209ENST00000560208 MAP3K13O43283 966 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 GABBR2O75899 941 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 PNMA6AP0CW24 399 aaPredicted RBP24.25■■□□□ 1.47
CRNDE-209ENST00000560208 ZNF132P52740 706 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 LIMK1P53667 647 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 DAOAP59103 153 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 BYSLQ13895 437 aaKnown RBP24.25■■□□□ 1.47
CRNDE-209ENST00000560208 SYCP1Q15431 976 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 TRIP4Q15650 581 aaPredicted RBP24.25■■□□□ 1.47
CRNDE-209ENST00000560208 DPY19L2P1Q6NXN4 242 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 LRSAM1Q6UWE0 723 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 CPXM2Q8N436 756 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 FRMD1Q8N878 549 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 FAM207AQ9NSI2 230 aaPredicted RBP24.25■■□□□ 1.47
CRNDE-209ENST00000560208 SFMBT1Q9UHJ3 866 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 SLC27A6Q9Y2P4 619 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 PI4KAP42356 2102 aa24.25■■□□□ 1.47
CRNDE-209ENST00000560208 A0A1W2PQF6 199 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 LRRC10BA6NIK2 292 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 PIK3R2O00459 728 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 CYBBP04839 570 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 GABRG2P18507 467 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 DHPSP49366 369 aaPredicted RBP24.24■■□□□ 1.47
CRNDE-209ENST00000560208 MAP7D1Q3KQU3 841 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 TCEAL6Q6IPX3 200 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 TCEAL3Q969E4 200 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 ACP6Q9NPH0 428 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 MBD1Q9UIS9 605 aaPredicted RBP24.24■■□□□ 1.47
CRNDE-209ENST00000560208 CNTN6Q9UQ52 1028 aa24.24■■□□□ 1.47
CRNDE-209ENST00000560208 ZBTB24O43167 697 aaPredicted RBP24.23■■□□□ 1.47
CRNDE-209ENST00000560208 SERPINC1P01008 464 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 UCHL3P15374 230 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 HARS2P49590 506 aaKnown RBP24.23■■□□□ 1.47
CRNDE-209ENST00000560208 DRAP1Q14919 205 aaPredicted RBP24.23■■□□□ 1.47
CRNDE-209ENST00000560208 FILIP1LQ4L180 1135 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 IL31Q6EBC2 164 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 LPCAT2Q7L5N7 544 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 CYP2U1Q7Z449 544 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 FAM217AQ8IXS0 508 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 IPO4Q8TEX9 1081 aaKnown RBP24.23■■□□□ 1.47
CRNDE-209ENST00000560208 IRGQQ8WZA9 623 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 SHC3Q92529 594 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 HSFY1Q96LI6 401 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 GABRG3Q99928 467 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 GANQ9H2C0 597 aa24.23■■□□□ 1.47
CRNDE-209ENST00000560208 TNRC6BQ9UPQ9 1833 aaKnown RBP24.23■■□□□ 1.47
CRNDE-209ENST00000560208 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 FOXN3O00409 490 aaPredicted RBP24.22■■□□□ 1.47
CRNDE-209ENST00000560208 TEX33O43247 280 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 THAP12O43422 761 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 GNA15P30679 374 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 GEN1Q17RS7 908 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 STPG1Q5TH74 334 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 KIAA1211LQ6NV74 962 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 TMEFF1Q8IYR6 380 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 DDI1Q8WTU0 396 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 ERLEC1Q96DZ1 483 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 CD248Q9HCU0 757 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 PLCB1Q9NQ66 1216 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 CACNA2D2Q9NY47 1150 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 SIK3Q9Y2K2 1263 aa24.22■■□□□ 1.47
CRNDE-209ENST00000560208 GFRA2O00451 464 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 POLR2FP61218 127 aaKnown RBP24.21■■□□□ 1.47
CRNDE-209ENST00000560208 MSANTD2Q6P1R3 559 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 RNF214Q8ND24 703 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 NEK11Q8NG66 645 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 PIWIL1Q96J94 861 aaKnown RBP24.21■■□□□ 1.47
CRNDE-209ENST00000560208 NLRC4Q9NPP4 1024 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 RTN4Q9NQC3 1192 aaKnown RBP24.21■■□□□ 1.47
CRNDE-209ENST00000560208 CALCOCO1Q9P1Z2 691 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 CLEC4EQ9ULY5 219 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 RAD54BQ9Y620 910 aa24.21■■□□□ 1.47
CRNDE-209ENST00000560208 WASH3PC4AMC7 463 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 EPHB6O15197 1021 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 MSI1O43347 362 aaKnown RBP24.2■■□□□ 1.46
CRNDE-209ENST00000560208 LTFP02788 710 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 MPPE1Q53F39 396 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 PPM1JQ5JR12 505 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 CLEC4CQ8WTT0 213 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 DDX1Q92499 740 aaKnown RBP24.2■■□□□ 1.46
CRNDE-209ENST00000560208 PIGKQ92643 395 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 NAP1L5Q96NT1 182 aaPredicted RBP24.2■■□□□ 1.46
CRNDE-209ENST00000560208 NAA15Q9BXJ9 866 aaKnown RBP24.2■■□□□ 1.46
CRNDE-209ENST00000560208 SLC2A11Q9BYW1 496 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 MIS12Q9H081 205 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 STON1Q9Y6Q2 735 aa24.2■■□□□ 1.46
CRNDE-209ENST00000560208 KHNYNO15037 678 aaKnown RBP24.19■■□□□ 1.46
CRNDE-209ENST00000560208 TSPAN3O60637 253 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms