RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 GRAP2O75791 330 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 CYP1A2P05177 515 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 IRF1P10914 325 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 FLT3P36888 993 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 GALCP54803 685 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 OXCT1P55809 520 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 KRT83P78385 493 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 GFPT1Q06210 699 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 PIGHQ14442 188 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 TCEAL1Q15170 157 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 DHCR24Q15392 516 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 BNIPLQ7Z465 357 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 DENND1CQ8IV53 801 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 RXFP2Q8WXD0 754 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 HAPLN3Q96S86 360 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 CHP1Q99653 195 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 EBF3Q9H4W6 596 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 DONSONQ9NYP3 566 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 TAS2R14Q9NYV8 317 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 IP6K2Q9UHH9 426 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 AGO1Q9UL18 857 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 NENFQ9UMX5 172 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 WNT6Q9Y6F9 365 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 KIAA1549LQ6ZVL6 1849 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 MYO1FO00160 1098 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 ADH5P11766 374 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 DRD1P21728 446 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 HTR7P34969 479 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 ARHGAP25P42331 645 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 NUBP1P53384 320 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 NME3Q13232 169 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 LRRC32Q14392 662 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 DGKKQ5KSL6 1271 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 RABGAP1LQ5R372 815 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 GPIHBP1Q8IV16 184 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 TTC16Q8NEE8 873 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 NTAN1Q96AB6 310 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 MCEEQ96PE7 176 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 MFSD1Q9H3U5 465 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 PIAS3Q9Y6X2 628 aa12.51□□□□□ -0.41
RABGGTA-215ENST00000560207 F5P12259 2224 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 KANSL1LA0AUZ9 987 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 F5H5T6 163 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 TRDMT1O14717 391 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 MSI1O43347 362 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 NARSO43776 548 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 NDUFA10O95299 355 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 KLKB1P03952 638 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 CYP17A1P05093 508 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 HMBSP08397 361 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 CTHP32929 405 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 GJA4P35212 333 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 PCK1P35558 622 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 MAGEA1P43355 309 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 CLCN5P51795 746 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 NRG1Q02297 640 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 GRSF1Q12849 480 aaKnown RBP eCLIP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 ZC3H12AQ5D1E8 599 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 RHBDF2Q6PJF5 856 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 SIX5Q8N196 739 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 SPC24Q8NBT2 197 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 HJURPQ8NCD3 748 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 CFAP57Q96MR6 1250 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 TBCBQ99426 244 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 HPS4Q9NQG7 708 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
RABGGTA-215ENST00000560207 TECTAO75443 2155 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 A0A0A6YYK5 440 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 TMEM221A6NGB7 291 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 M0R296 226 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 ARHGAP6O43182 974 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 CACNG3O60359 315 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 GPR37L1O60883 481 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 MTA2O94776 668 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 PENKP01210 267 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 PSMA2P25787 234 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 HADHBP55084 474 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms