RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CUEDC2Q9H467 287 aa20.73■□□□□ 0.91
RABGGTA-214ENST00000560163 TFIP11Q9UBB9 837 aaKnown RBP20.73■□□□□ 0.91
RABGGTA-214ENST00000560163 PCDHGA1Q9Y5H4 931 aa20.73■□□□□ 0.91
RABGGTA-214ENST00000560163 RAI2Q9Y5P3 530 aa20.73■□□□□ 0.91
RABGGTA-214ENST00000560163 MAST4O15021 2626 aa20.73■□□□□ 0.91
RABGGTA-214ENST00000560163 PTPRQQ9UMZ3 2332 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 ASS1P00966 412 aaKnown RBP20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 RPN1P04843 607 aaKnown RBP20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 P4HA1P13674 534 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 CD27P26842 260 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 DLG4P78352 724 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 AMPD3Q01432 767 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 INCA1Q0VD86 236 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 KNOP1Q1ED39 458 aaKnown RBP20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 ZACNQ401N2 412 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 CCDC157Q569K6 752 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 ENGASEQ8NFI3 743 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 TAF4BQ92750 862 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 DMAC2Q9NW81 257 aa20.72■□□□□ 0.91
RABGGTA-214ENST00000560163 SEMA4FO95754 770 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 PLA2G2AP14555 144 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 CUL4AQ13619 759 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 SPOPLQ6IQ16 392 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 UNC13DQ70J99 1090 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 DENND1CQ8IV53 801 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 TMEM174Q8WUU8 243 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 CDK5RAP1Q96SZ6 601 aaKnown RBP20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 BTBD1Q9H0C5 482 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 FTSJ1Q9UET6 329 aa20.71■□□□□ 0.91
RABGGTA-214ENST00000560163 A0A1B0GTQ1 180 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 STX6O43752 255 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 DFNA5O60443 496 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 CYBBP04839 570 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 HMBSP08397 361 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 RALAP11233 206 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 PDCP20941 246 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 RPS14P62263 151 aaKnown RBP20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 IL9RQ01113 521 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 ZBTB16Q05516 673 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 PDE4CQ08493 712 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 EFEMP1Q12805 493 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 NXPE2Q96DL1 559 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 SLC39A2Q9NP94 309 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 RASAL2Q9UJF2 1139 aa20.7■□□□□ 0.9
RABGGTA-214ENST00000560163 CLSTN1O94985 981 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 IGHV4-34P06331 123 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 SYT1P21579 422 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 HOXD9P28356 352 aaPredicted RBP20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 HLA-FP30511 346 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 NASPP49321 788 aaPredicted RBP20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 CLDN6P56747 220 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 RTP5Q14D33 572 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 SV2AQ7L0J3 742 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 KIAA0907Q7Z7F0 614 aaPredicted RBP20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 ZNF843Q8N446 348 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 DDI1Q8WTU0 396 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 DUSP16Q9BY84 665 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 PRSS16Q9NQE7 514 aa20.69■□□□□ 0.9
RABGGTA-214ENST00000560163 TP53BP1Q12888 1972 aaPredicted RBP20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 VILLO15195 856 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 FSBPO95073 299 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 C1SP09871 688 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 JUPP14923 745 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 CASP1P29466 404 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 SHBQ15464 509 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 INAVAQ3KP66 663 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 C1orf220Q5T0J3 134 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 C6orf118Q5T5N4 469 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 ADIPOR2Q86V24 386 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 SLC9A9Q8IVB4 645 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 ZC3H3Q8IXZ2 948 aaKnown RBP20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 ZNF366Q8N895 744 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 IQUBQ8NA54 791 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 LINC00301Q8NCQ3 95 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 CYB5D2Q8WUJ1 264 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 DHX58Q96C10 678 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 NT5C1AQ9BXI3 368 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 FBRSQ9HAH7 460 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 SGK2Q9HBY8 427 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 MARCH2Q9P0N8 246 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 PLXNA2O75051 1894 aa20.68■□□□□ 0.9
RABGGTA-214ENST00000560163 C10orf142B7Z368 130 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 CBX4O00257 560 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 ENC1O14682 589 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 CDK4P11802 303 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 BCAT1P54687 386 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 RACK1P63244 317 aaKnown RBP20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 SEMG2Q02383 582 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 ARID5AQ03989 594 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 PPP1R26Q5T8A7 1209 aaPredicted RBP20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 PCSK4Q6UW60 755 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 GATAD2AQ86YP4 633 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 GOLGA5Q8TBA6 731 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 TSC1Q92574 1164 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 BACH2Q9BYV9 841 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 NRSN2Q9GZP1 204 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 APOBEC3GQ9HC16 384 aaKnown RBP20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 PLA2G4CQ9UP65 541 aa20.67■□□□□ 0.9
RABGGTA-214ENST00000560163 MYLKQ15746 1914 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms