RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 SLC16A3O15427 465 aaKnown RBP18.19■□□□□ 0.5
CRTC3-208ENST00000560098 TIMM44O43615 452 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 OXTRP30559 389 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 PRCPP42785 496 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 HARS2P49590 506 aaKnown RBP18.19■□□□□ 0.5
CRTC3-208ENST00000560098 BST2Q10589 180 aaKnown RBP18.19■□□□□ 0.5
CRTC3-208ENST00000560098 MPPE1Q53F39 396 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 SGO2Q562F6 1265 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 TMEM215Q68D42 235 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 FMNL3Q8IVF7 1028 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 SORCS1Q8WY21 1168 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 ZDHHC5Q9C0B5 715 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 HESX1Q9UBX0 185 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 MSRB2Q9Y3D2 182 aa18.19■□□□□ 0.5
CRTC3-208ENST00000560098 A0A1B0GTW7 788 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 EPHX1P07099 455 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 ACADMP11310 421 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 PRKCHP24723 683 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 COPAP53621 1224 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 YWHAEP62258 255 aaKnown RBP18.18■□□□□ 0.5
CRTC3-208ENST00000560098 FKBP3Q00688 224 aaKnown RBP18.18■□□□□ 0.5
CRTC3-208ENST00000560098 ARID5AQ03989 594 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 ADIGQ0VDE8 80 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 GRIK2Q13002 908 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 PNOCQ13519 176 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 SERPINA13PQ6UXR4 307 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 RNF139Q8WU17 664 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 IPO9Q96P70 1041 aaKnown RBP18.18■□□□□ 0.5
CRTC3-208ENST00000560098 TSG101Q99816 390 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 GDPD2Q9HCC8 539 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 RALYQ9UKM9 306 aaKnown RBP18.18■□□□□ 0.5
CRTC3-208ENST00000560098 HBS1LQ9Y450 684 aaKnown RBP18.18■□□□□ 0.5
CRTC3-208ENST00000560098 IGF2RP11717 2491 aa18.18■□□□□ 0.5
CRTC3-208ENST00000560098 PCNX2A6NKB5 2137 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 SH3BP5O60239 455 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 IGLV3-19P01714 112 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 CD19P15391 556 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 HOXD9P28356 352 aaPredicted RBP18.17■□□□□ 0.5
CRTC3-208ENST00000560098 ZNF423Q2M1K9 1284 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 COBLL1Q53SF7 1204 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 ZNF658Q5TYW1 1059 aaPredicted RBP18.17■□□□□ 0.5
CRTC3-208ENST00000560098 DCAF12L1Q5VU92 463 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 BSPRYQ5W0U4 402 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 ZC3H3Q8IXZ2 948 aaKnown RBP18.17■□□□□ 0.5
CRTC3-208ENST00000560098 ZCCHC9Q8N567 271 aaKnown RBP18.17■□□□□ 0.5
CRTC3-208ENST00000560098 CAMK1GQ96NX5 476 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 NUP58Q9BVL2 599 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 MIR1-1HGQ9H1L0 117 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 SFMBT1Q9UHJ3 866 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 STOML2Q9UJZ1 356 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 CACNA1EQ15878 2313 aa18.17■□□□□ 0.5
CRTC3-208ENST00000560098 YJEFN3A6XGL0 299 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 METTL12A8MUP2 240 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 E7ENQ6 273 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 TSPAN3O60637 253 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 SETSIPP0DME0 302 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 VDRP11473 427 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 ZNF445P59923 1031 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 TRIP6Q15654 476 aaKnown RBP18.16■□□□□ 0.5
CRTC3-208ENST00000560098 ANKRD40Q6AI12 368 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 CACUL1Q86Y37 369 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 NAXDQ8IW45 347 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 SIX6OS1Q8N1H7 587 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 CHCHD4Q8N4Q1 142 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 UBA3Q8TBC4 463 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 ZCCHC14Q8WYQ9 949 aaKnown RBP18.16■□□□□ 0.5
CRTC3-208ENST00000560098 KCTD13Q8WZ19 329 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 EDEM1Q92611 657 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 ABCC13Q9NSE7 274 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 KIAA1257Q9ULG3 409 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 PCDHB9Q9Y5E1 797 aa18.16■□□□□ 0.5
CRTC3-208ENST00000560098 FAM221BA6H8Z2 402 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 O00370 1275 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 LATS1O95835 1130 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 HLA-FP30511 346 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 PMS1P54277 932 aaKnown RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 ADGRF1Q5T601 910 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 RAB44Q7Z6P3 723 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 FMR1NBQ8N0W7 255 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 UBR7Q8N806 425 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 OR2T3Q8NH03 318 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 WFIKKN2Q8TEU8 576 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 TMA16Q96EY4 203 aaKnown RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 GSDMAQ96QA5 445 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 CNGB3Q9NQW8 809 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 ARMCX3Q9UH62 379 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 SRRM3A6NNA2 597 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 BCAT2O15382 392 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 HLA-EP13747 358 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 TBXAS1P24557 533 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 LRMPQ12912 555 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 CAMK2GQ13555 558 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-208ENST00000560098 CHST9Q7L1S5 443 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 SCML4Q8N228 414 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 SLC35C1Q96A29 364 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 TMEM245Q9H330 911 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 PLA2G4CQ9UP65 541 aa18.15■□□□□ 0.5
CRTC3-208ENST00000560098 MSI1O43347 362 aaKnown RBP18.14■□□□□ 0.49
CRTC3-208ENST00000560098 SMC2O95347 1197 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms