RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 FAM124BQ9H5Z6 455 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-216ENST00000559819 ARHGEF4Q9NR80 690 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 CACNG4Q9UBN1 327 aa10.37□□□□□ -0.75
LRRC28-216ENST00000559819 E2F8A0AVK6 867 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 KPNA7A9QM74 516 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 I3L4J1 428 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 PIRO00625 290 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 GSC2O15499 205 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 DYNC1LI2O43237 492 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-216ENST00000559819 DNAJC6O75061 913 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 DGKIO75912 1065 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 KRT38O76015 456 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 CYP2C9P11712 490 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 CALB2P22676 271 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 MGAT1P26572 445 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 EPHX2P34913 555 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 AP1B1Q10567 949 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 KHDC1Q4VXA5 237 aaKnown RBP10.36□□□□□ -0.75
LRRC28-216ENST00000559819 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 LGSNQ5TDP6 509 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 GPR142Q7Z601 462 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 PIGZQ86VD9 579 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 COLGALT1Q8NBJ5 622 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 FBXO27Q8NI29 283 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 NPLOC4Q8TAT6 608 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 TFB1MQ8WVM0 346 aaKnown RBP10.36□□□□□ -0.75
LRRC28-216ENST00000559819 DNAJB3Q8WWF6 145 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 OLFM3Q96PB7 478 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 BTBD10Q9BSF8 475 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 FZD10Q9ULW2 581 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 UBQLN1Q9UMX0 589 aaKnown RBP10.36□□□□□ -0.75
LRRC28-216ENST00000559819 CREB3O43889 395 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 DARSP14868 501 aaKnown RBP10.36□□□□□ -0.75
LRRC28-216ENST00000559819 ZFXP17010 805 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-216ENST00000559819 DCAF6Q58WW2 860 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 WASHC2DQ5SRD0 308 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 LDLRAD1Q5T700 205 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 C4orf50Q6ZRC1 276 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 HFE2Q6ZVN8 426 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 TREML1Q86YW5 311 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 CRYBG2Q8N1P7 616 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 ARRDC4Q8NCT1 418 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 LRRC39Q96DD0 335 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 SIRPGQ9P1W8 387 aa10.36□□□□□ -0.75
LRRC28-216ENST00000559819 A0A0A0MRY4 1105 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 CCL15-CCL14A0A0B4J2E2 113 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 DCAF8L1A6NGE4 600 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RNF103O00237 685 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 KLF11O14901 512 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 GYG2O15488 501 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 CCDC22O60826 627 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 LYPLA1O75608 230 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ESRRAP11474 423 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 PSMB4P28070 264 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ARL4AP40617 200 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 NR2C2P49116 596 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 AQP5P55064 265 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 SNX16P57768 344 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 SESN3P58005 492 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 OCRLQ01968 901 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 NME3Q13232 169 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 TAF11Q15544 211 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 CCL15Q16663 113 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 CTU1Q7Z7A3 348 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RPAINQ86UA6 219 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 STKLD1Q8NE28 680 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 SPATA13Q96N96 652 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 FAM167BQ9BTA0 163 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 XAB2Q9HCS7 855 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 PPARGC1AQ9UBK2 798 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 PSAT1Q9Y617 370 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF487B1APH4 448 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ENO1P06733 434 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 BPGMP07738 259 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 MATKP42679 507 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RPL34P49207 117 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RPL10AP62906 217 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 KPNB1Q14974 876 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 UBXN11Q5T124 520 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 SYPL2Q5VXT5 272 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RFX8Q6ZV50 586 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 BZW1Q7L1Q6 419 aaKnown RBP10.35□□□□□ -0.75
LRRC28-216ENST00000559819 RNF169Q8NCN4 708 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 CCNYQ8ND76 341 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 APPL2Q8NEU8 664 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ADAM32Q8TC27 787 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 BRI3BPQ8WY22 251 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 P2RY11Q96G91 374 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 EBF4Q9BQW3 602 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 TINF2Q9BSI4 451 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 XPNPEP3Q9NQH7 507 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 SYBUQ9NX95 663 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 TAS2R1Q9NYW7 299 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 MOCS1Q9NZB8 636 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 TPP1O14773 563 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 ITM2AO43736 263 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 KRT36O76013 467 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 IL1BP01584 269 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 AMHP03971 560 aa10.35□□□□□ -0.75
LRRC28-216ENST00000559819 GSTA2P09210 222 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms