RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 KIAA1549LQ6ZVL6 1849 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 A0A1W2PQH9 124 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 RNF225M0QZC1 329 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 O00370 1275 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 NCAM2O15394 837 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 TLR5O60602 858 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 TBX18O95935 607 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 CALCAP01258 141 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 PAEPP09466 180 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 GJA4P35212 333 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 NBL1P41271 181 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 IFNAR2P48551 515 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 ZNF132P52740 706 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 BCAT1P54687 386 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 APBA1Q02410 837 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 GCNT1Q02742 428 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 CETN1Q12798 172 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 MTAPQ13126 283 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 RAB41Q5JT25 222 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 C1orf228Q6PIY5 440 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 TMEM270Q6UE05 265 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 Q6ZS52 159 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 CCDC186Q7Z3E2 898 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 SCD5Q86SK9 330 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 PIGZQ86VD9 579 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 VWA5B2Q8N398 1253 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 CPA6Q8N4T0 437 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 ANKRD52Q8NB46 1076 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 ATP2A3Q93084 1043 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 CRACR2AQ9BSW2 395 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 DNAI2Q9GZS0 605 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 ACBD3Q9H3P7 528 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 LMAN1LQ9HAT1 526 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 PRMT8Q9NR22 394 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 TLR8Q9NR97 1041 aaKnown RBP6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 SPATA6Q9NWH7 488 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 CFAP97Q9P2B7 532 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 GGT7Q9UJ14 662 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 PCDHB4Q9Y5E5 795 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 SPTBN4Q9H254 2564 aa6.33□□□□□ -1.4
CTDSPL2-204ENST00000558966 PROB1E7EW31 1015 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 TRDMT1O14717 391 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 XPO1O14980 1071 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 MDM4O15151 490 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 LAMTOR5O43504 91 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 GREM1O60565 184 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 CYP17A1P05093 508 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 SP9P0CG40 484 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 VDRP11473 427 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 TDGF1P13385 188 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 CD19P15391 556 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 SLC9A1P19634 815 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 MTIF2P46199 727 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 MRE11P49959 708 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 PLAURQ03405 335 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 BST2Q10589 180 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 HYAL2Q12891 473 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 HSP90AA4PQ58FG1 418 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 TMEM196Q5HYL7 178 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 FSTL4Q6MZW2 842 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 GJB7Q6PEY0 223 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 BHLHA9Q7RTU4 235 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 ALYREFQ86V81 257 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 KIAA1958Q8N8K9 716 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 RBBP8NLQ8NC74 664 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 EZH1Q92800 747 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 CNTNAP3BQ96NU0 1288 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 HHIPQ96QV1 700 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 CNTNAP3Q9BZ76 1288 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 UBXN6Q9BZV1 441 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 THAP9Q9H5L6 903 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 LIN7BQ9HAP6 207 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 FBRSL1Q9HCM7 1045 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 C2orf42Q9NWW7 574 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 NAGPAQ9UK23 515 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 NUDT5Q9UKK9 219 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 CNTN6Q9UQ52 1028 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 E2F8A0AVK6 867 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 GTPBP10A4D1E9 387 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 GOLGA6L22H0YM25 854 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 J3QW42 95 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 MAP3K6O95382 1288 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 NFATC1O95644 943 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 EGFP01133 1207 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 IRF1P10914 325 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 RARGP13631 454 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 OPRD1P41143 372 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 TKTL1P51854 596 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 RACK1P63244 317 aaKnown RBP6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 SATB1Q01826 763 aa6.32□□□□□ -1.4
CTDSPL2-204ENST00000558966 LRRC32Q14392 662 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms