RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	APBB3	O95704	486 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	ASS1	P00966	412 aa	Known RBP	7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	CD58	P19256	250 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	PTMS	P20962	102 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	SDHB	P21912	280 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	PIK3CA	P42336	1068 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	ASPA	P45381	313 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	PPP3CC	P48454	512 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	PDE6C	P51160	858 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	VAMP7	P51809	220 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	AP3M2	P53677	418 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	SLC5A3	P53794	718 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	FBXO43	Q4G163	708 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	LY6G5C	Q5SRR4	150 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	PERM1	Q5SV97	790 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	HECTD3	Q5T447	861 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	TCEAL6	Q6IPX3	200 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	ANO7	Q6IWH7	933 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	GPRIN1	Q7Z2K8	1008 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	TMEM25	Q86YD3	366 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	BBS7	Q8IWZ6	715 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	CRYBG2	Q8N1P7	616 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	CAMKK1	Q8N5S9	505 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	ALLC	Q8N6M5	410 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	FRMD1	Q8N878	549 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	TSTD1	Q8NFU3	115 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	TAS1R2	Q8TE23	839 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	TTC9	Q92623	222 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	TCEAL3	Q969E4	200 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	SMARCD1	Q96GM5	515 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	CEP295NL	Q96MC4	621 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	RTKN	Q9BST9	563 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	APOBEC3G	Q9HC16	384 aa	Known RBP	7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	DMAP1	Q9NPF5	467 aa	Predicted RBP	7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	OSER1	Q9NX31	292 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	IL37	Q9NZH6	218 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	EHD2	Q9NZN4	543 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	USP25	Q9UHP3	1055 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	NUDT5	Q9UKK9	219 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	FRMD4B	Q9Y2L6	1034 aa		7.39	□□□□□ -1.23
MARK3-215	ENST00000558787	SPAG17	Q6Q759	2223 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ATP8B3	O60423	1300 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	LAMA1	P25391	3075 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	CCDC163	A0A0D9SF12	145 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	FAM237A	A0A1B0GTK4	181 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	SGK1	O00141	431 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	SLC9A3R1	O14745	358 aa	Predicted RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	MDM4	O15151	490 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	LRP3	O75074	770 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	KAT7	O95251	611 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ZDHHC11B	P0C7U3	371 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ZNF806	P0C7X5	589 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ADH5	P11766	374 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	PFKL	P17858	780 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	BCKDHB	P21953	392 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	NR2F2	P24468	414 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	GBP1	P32455	592 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	MPL	P40238	635 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	WAS	P42768	502 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	GPLD1	P80108	840 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	CREB5	Q02930	508 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ADAM9	Q13443	819 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	AASDH	Q4L235	1098 aa	Predicted RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	PPM1J	Q5JR12	505 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	KRBA2	Q6ZNG9	492 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	WFDC8	Q8IUA0	241 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	FAM186B	Q8IYM0	893 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	C12orf50	Q8NA57	414 aa	Predicted RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	TXNDC5	Q8NBS9	432 aa	Known RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	NETO1	Q8TDF5	533 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	RLN3	Q8WXF3	142 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	SEMA4D	Q92854	862 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ERCC4	Q92889	916 aa	Predicted RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	EXOC4	Q96A65	974 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ZC3H10	Q96K80	434 aa	Known RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	TNIP3	Q96KP6	325 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	PNKP	Q96T60	521 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	NACA2	Q9H009	215 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	NMUR1	Q9HB89	426 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	ARHGEF4	Q9NR80	690 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	EBF1	Q9UH73	591 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	TRAF3IP3	Q9Y228	551 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	SH3BP1	Q9Y3L3	701 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	EML5	Q05BV3	1969 aa		7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	HELZ	P42694	1942 aa	Known RBP	7.38	□□□□□ -1.23
MARK3-215	ENST00000558787	GON4L	Q3T8J9	2241 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	MYO16	Q9Y6X6	1858 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787		A0A1W2PQH9	124 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	E2F8	A0AVK6	867 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	FAM92A	A1XBS5	289 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	TBC1D3B	A6NDS4	549 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	PATE3	B3GLJ2	98 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	HHLA1	C9JL84	531 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	IKBKB	O14920	756 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	CYP26A1	O43174	497 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	TLR5	O60602	858 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	TULP3	O75386	442 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	RHOBTB3	O94955	611 aa		7.37	□□□□□ -1.23
MARK3-215	ENST00000558787	ZNF202	O95125	648 aa		7.37	□□□□□ -1.23

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