RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MAN2B2Q9Y2E5 1009 aa12.51□□□□□ -0.41
SMAD3-206ENST00000558739 F8P00451 2351 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 NPC1O15118 1278 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 LSSP48449 732 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 ZSCAN23Q3MJ62 389 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 C3orf38Q5JPI3 329 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 NCEH1Q6PIU2 408 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 CCDC81Q6ZN84 652 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 PAQR9Q6ZVX9 377 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 GPRIN1Q7Z2K8 1008 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 ZC3H3Q8IXZ2 948 aaKnown RBP12.5□□□□□ -0.41
SMAD3-206ENST00000558739 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
SMAD3-206ENST00000558739 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-206ENST00000558739 THSD1Q9NS62 852 aa12.5□□□□□ -0.41
SMAD3-206ENST00000558739 LSM7Q9UK45 103 aaKnown RBP12.5□□□□□ -0.41
SMAD3-206ENST00000558739 ZFC3H1O60293 1989 aaKnown RBP12.5□□□□□ -0.41
SMAD3-206ENST00000558739 A0A1B0GVM2 712 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CLEC18AA5D8T8 446 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CYP26A1O43174 497 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 PPP1R37O75864 691 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 BEST1O76090 585 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CD38P28907 300 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 GNL1P36915 607 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-206ENST00000558739 ARRB1P49407 418 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-206ENST00000558739 NXPH1P58417 271 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 POU5F1Q01860 360 aaKnown RBP12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CLEC18BQ6UXF7 455 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 DTHD1Q6ZMT9 781 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 DPH6Q7L8W6 267 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CLEC18CQ8NCF0 446 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 B3GALNT2Q8NCR0 500 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 OR6B3Q8NGW1 331 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CACTINQ8WUQ7 758 aaKnown RBP12.49□□□□□ -0.41
SMAD3-206ENST00000558739 UCMAQ8WVF2 138 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 PSMG3-AS1Q96PY0 264 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 SNX25Q9H3E2 840 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 NMUR1Q9HB89 426 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 PRSS16Q9NQE7 514 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.414e-6■■■■■ 111.8
SMAD3-206ENST00000558739 KRT82Q9NSB4 513 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 BLOC1S4Q9NUP1 217 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
SMAD3-206ENST00000558739 CASC3O15234 703 aaKnown RBP12.48□□□□□ -0.41
SMAD3-206ENST00000558739 OPA1O60313 960 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 STC2O76061 302 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 C7P10643 843 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 GALCP54803 685 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 GRIN1Q05586 938 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 MCM6Q14566 821 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 ARL13BQ3SXY8 428 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 FNDC3BQ53EP0 1204 aaKnown RBP12.48□□□□□ -0.41
SMAD3-206ENST00000558739 TMC6Q7Z403 805 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 LSMEM2Q8N112 164 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 ELMO3Q96BJ8 720 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 PRR11Q96HE9 360 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-206ENST00000558739 CDK5RAP3Q96JB5 506 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 C8orf76Q96K31 380 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 OSBPL2Q9H1P3 480 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 TMEM245Q9H330 911 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 SGK2Q9HBY8 427 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 CYLDQ9NQC7 956 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 PDZD2O15018 2839 aa12.48□□□□□ -0.41
SMAD3-206ENST00000558739 NYNRINQ9P2P1 1898 aaKnown RBP12.48□□□□□ -0.41
SMAD3-206ENST00000558739 BLACEA4D250 179 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 VWA3AA6NCI4 1184 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 C10orf142B7Z368 130 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 TLR4O00206 839 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 YKT6O15498 198 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
SMAD3-206ENST00000558739 DNTTP04053 509 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
SMAD3-206ENST00000558739 EHHADHQ08426 723 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
SMAD3-206ENST00000558739 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 DEPDC7Q96QD5 511 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 SMOQ99835 787 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 FGFBP2Q9BYJ0 223 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 DMAP1Q9NPF5 467 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-206ENST00000558739 UCKL1Q9NWZ5 548 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
SMAD3-206ENST00000558739 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
SMAD3-206ENST00000558739 LY6G6EA0A0G2JKS1 128 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 A0A1W2PP55 124 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 FFAR2O15552 330 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-206ENST00000558739 HMBSP08397 361 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 CCDC130P13994 396 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 SCP2P22307 547 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 HLA-FP30511 346 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms