RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 E2F5Q15329 346 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 GOLGA7BQ2TAP0 167 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CBWD6Q4V339 395 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 SGO2Q562F6 1265 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 RAB41Q5JT25 222 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CBWD3Q5JTY5 395 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CBWD5Q5RIA9 395 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 EMC10Q5UCC4 262 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 DAB2IPQ5VWQ8 1189 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 EGFLAMQ63HQ2 1017 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 SCD5Q86SK9 330 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 PIGZQ86VD9 579 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CHPFQ8IZ52 775 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF276Q8N554 614 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 SLC4A11Q8NBS3 891 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 TIGD1Q96MW7 591 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 UBXN6Q9BZV1 441 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 METTL14Q9HCE5 456 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 RXFP3Q9NSD7 469 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 OLA1Q9NTK5 396 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 MARCH2Q9P0N8 246 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 CALCOCO1Q9P1Z2 691 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 EVLQ9UI08 416 aaPredicted RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 TSPAN16Q9UKR8 245 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 COQ4Q9Y3A0 265 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
TRAF3-205ENST00000558700 MYO18AQ92614 2054 aaKnown RBP8.45□□□□□ -1.06
TRAF3-205ENST00000558700 ABCA7Q8IZY2 2146 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 MUC22E2RYF6 1773 aaPredicted RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 TRIM49BA6NDI0 452 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 GFRA2O00451 464 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 XPO1O14980 1071 aaKnown RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 KHNYNO15037 678 aaKnown RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF217O75362 1048 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 ZBED1O96006 694 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 PENKP01210 267 aaPredicted RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 CYBBP04839 570 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SETSIPP0DME0 302 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 HOXD12P35452 270 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 CHKAP35790 457 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 TKTL1P51854 596 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 YWHAGP61981 247 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 DHX9Q08211 1270 aaKnown RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 CETN1Q12798 172 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 EFEMP1Q12805 493 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 CCDC40Q4G0X9 1142 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SPDYCQ5MJ68 293 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 LYSMD4Q5XG99 296 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SLC36A4Q6YBV0 504 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 RABEPKQ7Z6M1 372 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SIX6OS1Q8N1H7 587 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 ANKRD52Q8NB46 1076 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 ENGASEQ8NFI3 743 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SPATA20Q8TB22 786 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 UCMAQ8WVF2 138 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 RLN3Q8WXF3 142 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 BHMTQ93088 406 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SLC35C1Q96A29 364 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 PLD4Q96BZ4 506 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 CEP63Q96MT8 703 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 NT5C1BQ96P26 610 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 IPO9Q96P70 1041 aaKnown RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 NUSAP1Q9BXS6 441 aaKnown RBP8.44□□□□□ -1.06
TRAF3-205ENST00000558700 LRRC4Q9HBW1 653 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 ZDHHC4Q9NPG8 344 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 TMEM9BQ9NQ34 198 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 NUDT5Q9UKK9 219 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 SLC27A6Q9Y2P4 619 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
TRAF3-205ENST00000558700 CKAP5Q14008 2032 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 SLC12A8A0AV02 714 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 BICDL2A1A5D9 508 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 PRRT4C9JH25 899 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ERVH48-1M5A8F1 160 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 O00370 1275 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 NPC1O15118 1278 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 TRIM24O15164 1050 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 HMBSP08397 361 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 VDRP11473 427 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 GABRG2P18507 467 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 WASP42768 502 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 FMO5P49326 533 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 GDF10P55107 478 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF445P59923 1031 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 RPL6Q02878 288 aaKnown RBP8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ADIGQ0VDE8 80 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 LMAN2Q12907 356 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 STARD3Q14849 445 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 EIF4HQ15056 248 aaKnown RBP8.43□□□□□ -1.06
TRAF3-205ENST00000558700 TRIM61Q5EBN2 209 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 FYB2Q5VWT5 728 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ANKRD40Q6AI12 368 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 FOXR2Q6PJQ5 311 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ARMCX6Q7L4S7 300 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ANKS1BQ7Z6G8 1248 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 SYT12Q8IV01 421 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ELOA2Q8IYF1 753 aaPredicted RBP8.43□□□□□ -1.06
TRAF3-205ENST00000558700 CPXM2Q8N436 756 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms