RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RPS6KA1Q15418 735 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 EML3Q32P44 896 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 DGKKQ5KSL6 1271 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 NAIF1Q69YI7 327 aaPredicted RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 LRRC31Q6UY01 552 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 MAMSTRQ6ZN01 415 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 GSPT2Q8IYD1 628 aaKnown RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 SYCE1Q8N0S2 351 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 ZBTB44Q8NCP5 570 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 ACTRT1Q8TDG2 376 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 FBXO32Q969P5 355 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 SMARCD1Q96GM5 515 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 IER2Q9BTL4 223 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 LINC00597Q9H2U6 94 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 SEMA4AQ9H3S1 761 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 ECT2Q9H8V3 914 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 CYP3A43Q9HB55 503 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 DMAP1Q9NPF5 467 aaPredicted RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 C2orf42Q9NWW7 574 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 DUS2Q9NX74 493 aaKnown RBP10.77□□□□□ -0.69
TPM1-212ENST00000558347 DMXL1Q9Y485 3027 aa10.77□□□□□ -0.69
TPM1-212ENST00000558347 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
TPM1-212ENST00000558347 MYO16Q9Y6X6 1858 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 TRDMT1O14717 391 aaKnown RBP10.76□□□□□ -0.69
TPM1-212ENST00000558347 CILPO75339 1184 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 RTN3O95197 1032 aaPredicted RBP10.76□□□□□ -0.69
TPM1-212ENST00000558347 PFKLP17858 780 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 ADORA2BP29275 332 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 HOXC13P31276 330 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 CXCR5P32302 372 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 MAP3K7CLP57077 242 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 BPIFB4P59827 614 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SLC7A9P82251 487 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SKOR1P84550 965 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 ARID5AQ03989 594 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 PTK2Q05397 1052 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 TMEM196Q5HYL7 178 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 FSTL4Q6MZW2 842 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 PKN3Q6P5Z2 889 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 ZNF571Q7Z3V5 609 aaPredicted RBP10.76□□□□□ -0.69
TPM1-212ENST00000558347 SLFN11Q7Z7L1 901 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SRLQ86TD4 932 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 TTC39CQ8N584 583 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SUMF1Q8NBK3 374 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 OLIG1Q8TAK6 271 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SLITRK1Q96PX8 696 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 FAM107BQ9H098 131 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 FBRSL1Q9HCM7 1045 aaKnown RBP10.76□□□□□ -0.69
TPM1-212ENST00000558347 CSNK1G1Q9HCP0 422 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 ZSCAN32Q9NX65 697 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 SMPD4Q9NXE4 827 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 IL37Q9NZH6 218 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 CHORDC1Q9UHD1 332 aaPredicted RBP10.76□□□□□ -0.69
TPM1-212ENST00000558347 ADAMTS1Q9UHI8 967 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 NAGPAQ9UK23 515 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 PCDHGA2Q9Y5H1 932 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 CPQQ9Y646 472 aa10.76□□□□□ -0.69
TPM1-212ENST00000558347 FAM92AA1XBS5 289 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 BHMG1C9JSJ3 638 aaPredicted RBP10.75□□□□□ -0.69
TPM1-212ENST00000558347 CCDC188H7C350 402 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
TPM1-212ENST00000558347 CYP26A1O43174 497 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 LILRB5O75023 590 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 HEXIM1O94992 359 aaKnown RBP10.75□□□□□ -0.69
TPM1-212ENST00000558347 FTCDO95954 541 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 H2AFZP0C0S5 128 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 CXCL12P48061 93 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 IFNAR2P48551 515 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 PGFP49763 221 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 PDE6CP51160 858 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 GALK1P51570 392 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 CCR3P51677 355 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 ZNF132P52740 706 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 SLC7A5Q01650 507 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 CUL1Q13616 776 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 ZNF394Q53GI3 561 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 EMC10Q5UCC4 262 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 ALKBH5Q6P6C2 394 aaKnown RBP10.75□□□□□ -0.69
TPM1-212ENST00000558347 CLEC20AQ6ZU45 233 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 H2AFVQ71UI9 128 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 GPRIN1Q7Z2K8 1008 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 CPA6Q8N4T0 437 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 LRRC57Q8N9N7 239 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 SLC30A5Q8TAD4 765 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 EPS8L1Q8TE68 723 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 OVCA2Q8WZ82 227 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 ATP2A3Q93084 1043 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 HNRNPABQ99729 332 aaKnown RBP10.75□□□□□ -0.69
TPM1-212ENST00000558347 NT5C1AQ9BXI3 368 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 CISHQ9NSE2 258 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 GMIPQ9P107 970 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 NOCTQ9UK39 431 aaKnown RBP10.75□□□□□ -0.69
TPM1-212ENST00000558347 DNAH14Q0VDD8 3507 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 FAM186AA6NE01 2351 aa10.75□□□□□ -0.69
TPM1-212ENST00000558347 DCHS1Q96JQ0 3298 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 HHLA1C9JL84 531 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 K7ESF4 209 aa10.74□□□□□ -0.69
TPM1-212ENST00000558347 COCHO43405 550 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms