RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HMBSP08397 361 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 L1CAMP32004 1257 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 CDKN2BP42772 138 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 HARS2P49590 506 aaKnown RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 DPYSL3Q14195 570 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 CA9Q16790 459 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 PPP6R3Q5H9R7 873 aaPredicted RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 RARS2Q5T160 578 aaKnown RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 GPR158Q5T848 1215 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 SLC13A5Q86YT5 568 aaPredicted RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 C12orf76Q8N812 135 aaPredicted RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 ARL14EPQ8N8R7 260 aaPredicted RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 MAB21L3Q8N8X9 362 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 BTN2A3PQ96KV6 586 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 EPAS1Q99814 870 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 MAK16Q9BXY0 300 aaKnown RBP17.48■□□□□ 0.39
SNX1-203ENST00000558040 RNF38Q9H0F5 515 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 OSBPL2Q9H1P3 480 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 TASP1Q9H6P5 420 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 MTCH2Q9Y6C9 303 aa17.48■□□□□ 0.39
SNX1-203ENST00000558040 ANAPC1Q9H1A4 1944 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 hCG_1818297A0A087WSY0 165 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 GOLGA6L10A0A0M3HER8 536 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 PAGE1O75459 146 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 TJP3O95049 919 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 MOCS2O96007 188 aaPredicted RBP17.47■□□□□ 0.39
SNX1-203ENST00000558040 HTR7P34969 479 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 CCR2P41597 374 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 SLC7A9P82251 487 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 ADAM15Q13444 863 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 TFDP2Q14188 446 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 TEAD2Q15562 447 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 TAZQ16635 292 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 PRSS36Q5K4E3 855 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 AADACL2Q6P093 401 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 GPR149Q86SP6 731 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.47■□□□□ 0.39
SNX1-203ENST00000558040 RPGRIP1Q96KN7 1286 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 KCTD15Q96SI1 283 aaPredicted RBP17.47■□□□□ 0.39
SNX1-203ENST00000558040 KLF16Q9BXK1 252 aaPredicted RBP17.47■□□□□ 0.39
SNX1-203ENST00000558040 PRDM16Q9HAZ2 1276 aa17.47■□□□□ 0.39
SNX1-203ENST00000558040 MRPS23Q9Y3D9 190 aaKnown RBP17.47■□□□□ 0.39
SNX1-203ENST00000558040 CTAGE15A4D2H0 777 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 LINC01565O15544 149 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 CD48P09326 243 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 CTAGE8P0CG41 777 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 GJA1P17302 382 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 IGFBP4P22692 258 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 AVPR1AP37288 418 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 SLC11A2P49281 568 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 NTHL1P78549 312 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 SLC5A9Q2M3M2 681 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 KAZNQ674X7 775 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
SNX1-203ENST00000558040 CTAGE6Q86UF2 777 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 DDX42Q86XP3 938 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX1-203ENST00000558040 RFX6Q8HWS3 928 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 CTAGE4Q8IX94 777 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 PYROXD2Q8N2H3 581 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 TSC1Q92574 1164 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 TCEAL4Q96EI5 215 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 C1orf74Q96LT6 269 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 CYP2S1Q96SQ9 504 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 SLITRK6Q9H5Y7 841 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 ANLNQ9NQW6 1124 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 TMPRSS4Q9NRS4 437 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 OR12D3Q9UGF7 316 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 CPQQ9Y646 472 aa17.46■□□□□ 0.39
SNX1-203ENST00000558040 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 PDE2AO00408 941 aaPredicted RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 EEF2KO00418 725 aaKnown RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 KRIT1O00522 736 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 SOX1O00570 391 aaPredicted RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 CREB3O43889 395 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 MOSPD3O75425 235 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 STC2O76061 302 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 LATS1O95835 1130 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 KRT10P13645 584 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 ZFXP17010 805 aaPredicted RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 HCAR3P49019 387 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 TPI1P60174 286 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 NRG1Q02297 640 aaPredicted RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 ITIH3Q06033 890 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 SEMA3BQ13214 749 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 ANKRD20A8PQ5CZ79 823 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 CES5AQ6NT32 575 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 CMTM8Q8IZV2 173 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 AZIN2Q96A70 460 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 FAF2Q96CS3 445 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 CSPG4P5Q96PW8 444 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 RNF157Q96PX1 679 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 SLC22A12Q96S37 553 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 DDX50Q9BQ39 737 aaKnown RBP17.45■□□□□ 0.38
SNX1-203ENST00000558040 CARD6Q9BX69 1037 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 HEMGNQ9BXL5 484 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 SLC46A2Q9BY10 475 aa17.45■□□□□ 0.38
SNX1-203ENST00000558040 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms