RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CCDC185Q8N715 623 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 MAGEB5Q9BZ81 275 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.87■□□□□ 0.13
NEDD1-213ENST00000557644 IGSF9Q9P2J2 1179 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 LSM7Q9UK45 103 aaKnown RBP15.87■□□□□ 0.13
NEDD1-213ENST00000557644 PPP2R2CQ9Y2T4 447 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 PAXBP1Q9Y5B6 917 aa15.87■□□□□ 0.13
NEDD1-213ENST00000557644 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 GOLGA6L7A0A1B0GV03 622 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 NARSO43776 548 aaKnown RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 GGCXP38435 758 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 VCPP55072 806 aaKnown RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 TJAP1Q5JTD0 557 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 UNC45BQ8IWX7 931 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 TRMT61BQ9BVS5 477 aaKnown RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 EBF3Q9H4W6 596 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 DUS2Q9NX74 493 aaKnown RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 PCSK1NQ9UHG2 260 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 HYOU1Q9Y4L1 999 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 TRDMT1O14717 391 aaKnown RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 BUB1BO60566 1050 aaPredicted RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 PROSCO94903 275 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 APOEP02649 317 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 ARSAP15289 507 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 MIPP30301 263 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 ARHGAP25P42331 645 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 PIGHQ14442 188 aaPredicted RBP15.86■□□□□ 0.13
NEDD1-213ENST00000557644 PPP2R5DQ14738 602 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 NADSYN1Q6IA69 706 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 YAF2Q8IY57 180 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 NIPA2Q8N8Q9 360 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 DEPDC1BQ8WUY9 529 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 OSCP1Q8WVF1 389 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 NXPE3Q969Y0 559 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 PEBP4Q96S96 227 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 FAM83CQ9BQN1 747 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 LZTFL1Q9NQ48 299 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 ARHGEF38Q9NXL2 777 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 SNX10Q9Y5X0 201 aa15.86■□□□□ 0.13
NEDD1-213ENST00000557644 OTOL1A6NHN0 477 aaPredicted RBP15.85■□□□□ 0.13
NEDD1-213ENST00000557644 BTNL10A8MVZ5 291 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 RNF8O76064 485 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 NAP1L1P55209 391 aaKnown RBP15.85■□□□□ 0.13
NEDD1-213ENST00000557644 GJD3Q8N144 294 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 TTC8Q8TAM2 541 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 P2RY11Q96G91 374 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 DCLK3Q9C098 648 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 THG1LQ9NWX6 298 aaKnown RBP15.85■□□□□ 0.13
NEDD1-213ENST00000557644 PAGE1O75459 146 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 SLC2A3P11169 496 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 IL1R2P27930 398 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 HADHBP55084 474 aaKnown RBP15.85■□□□□ 0.13
NEDD1-213ENST00000557644 EML3Q32P44 896 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 FAM133BQ5BKY9 247 aaKnown RBP15.85■□□□□ 0.13
NEDD1-213ENST00000557644 BRMS1LQ5PSV4 323 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 PIK3R6Q5UE93 754 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 TXNRD3NBQ6F5E7 133 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 RFWD3Q6PCD5 774 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 RNF135Q8IUD6 432 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 ADGRG2Q8IZP9 1017 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 TPCN2Q8NHX9 752 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 MYEOVQ96EZ4 313 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 BTN2A3PQ96KV6 586 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 GTSE1Q9NYZ3 720 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 GUCA1BQ9UMX6 200 aa15.85■□□□□ 0.13
NEDD1-213ENST00000557644 ARNTLO00327 626 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 ACSL4O60488 711 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 MOCS3O95396 460 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 DESP17661 470 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 SLC6A4P31645 630 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 ADRA1BP35368 520 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 SLC11A2P49281 568 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 TDGQ13569 410 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 CYP4V2Q6ZWL3 525 aaPredicted RBP15.84■□□□□ 0.13
NEDD1-213ENST00000557644 BHMTQ93088 406 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 SIK2Q9H0K1 926 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 BRD9Q9H8M2 597 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 HPS4Q9NQG7 708 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 USP18Q9UMW8 372 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 CHADO15335 359 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 SSR1P43307 286 aaKnown RBP15.84■□□□□ 0.13
NEDD1-213ENST00000557644 IFNAR2P48551 515 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 ACAP1Q15027 740 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 ARHGAP29Q52LW3 1261 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 MS4A13Q5J8X5 152 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 ADGRF1Q5T601 910 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 RAP1GAP2Q684P5 730 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 TPGS1Q6ZTW0 290 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 TXLNBQ8N3L3 684 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 ATP6V0D2Q8N8Y2 350 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 GPATCH2LQ9NWQ4 482 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 TRMT1Q9NXH9 659 aaKnown RBP15.84■□□□□ 0.13
NEDD1-213ENST00000557644 TBC1D14Q9P2M4 693 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 STOML2Q9UJZ1 356 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 HS3ST4Q9Y661 456 aa15.84■□□□□ 0.13
NEDD1-213ENST00000557644 TTC28Q96AY4 2481 aa15.83■□□□□ 0.13
NEDD1-213ENST00000557644 PCK1P35558 622 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 TAS2R40P59535 323 aa15.83■□□□□ 0.12
NEDD1-213ENST00000557644 SMTNL2Q2TAL5 461 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms