RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 C11orf96Q7Z7L8 435 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 SLC15A4Q8N697 577 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 FAM98AQ8NCA5 519 aaKnown RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 SPSB4Q96A44 273 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 APIPQ96GX9 242 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 BTBD1Q9H0C5 482 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 NUP62CLQ9H1M0 184 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 PRO3102Q9H379 93 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 FAM83DQ9H4H8 585 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 TRIM36Q9NQ86 728 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 SERHLQ9NQF3 203 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 ARPP21Q9UBL0 812 aaPredicted RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 OGDHLQ9ULD0 1010 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 NDRG4Q9ULP0 352 aaKnown RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 G3BP2Q9UN86 482 aaKnown RBP4.53□□□□□ -1.68
CHD8-212ENST00000557329 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 ZNF609O15014 1411 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 RIC1Q4ADV7 1423 aa4.53□□□□□ -1.68
CHD8-212ENST00000557329 SALL3Q9BXA9 1300 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 TAF1P21675 1872 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 LINC00473A8K010 186 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 DCLK1O15075 740 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 TJP3O95049 919 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 NPSP0C0P6 89 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 KITP10721 976 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 MYF5P13349 255 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 BRAFP15056 766 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 CHRM3P20309 590 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 PRKAR2BP31323 418 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 ZNF134P52741 427 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 TPTEP56180 551 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 HNRNPA0Q13151 305 aaKnown RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 CTBP1Q13363 440 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 CCNIQ14094 377 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 CNGA2Q16280 664 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 LRIT3Q3SXY7 679 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 HSP90AB3PQ58FF7 597 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 TSTD2Q5T7W7 516 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 TTLL5Q6EMB2 1281 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 RGS7BPQ6MZT1 257 aaPredicted RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 PARS2Q7L3T8 475 aaKnown RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 YAF2Q8IY57 180 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 SPARTQ8N0X7 666 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 OSCP1Q8WVF1 389 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 ZC3H10Q96K80 434 aaKnown RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 MSLNLQ96KJ4 702 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 GUCD1Q96NT3 240 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 BBC3Q96PG8 261 aaPredicted RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 STRBPQ96SI9 672 aaKnown RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 P2RX7Q99572 595 aaKnown RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 CDX2Q99626 313 aaPredicted RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 LBHD1Q9BQE6 289 aaPredicted RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 C22orf23Q9BZE7 217 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 SEMA4CQ9C0C4 833 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 MS4A7Q9GZW8 240 aaPredicted RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 ZNF287Q9HBT7 754 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 PADI4Q9UM07 663 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.52□□□□□ -1.69
CHD8-212ENST00000557329 PCSK5Q92824 1860 aa4.52□□□□□ -1.69
CHD8-212ENST00000557329 FRMPD2Q68DX3 1309 aaPredicted RBP4.51□□□□□ -1.69
CHD8-212ENST00000557329 RBBP6Q7Z6E9 1792 aaKnown RBP4.51□□□□□ -1.69
CHD8-212ENST00000557329 UBR2Q8IWV8 1755 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 TRIM43BA6NCK2 446 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 AQP7P3A6NL99 342 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 PPM1DO15297 605 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 TLR2O60603 784 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 KCNJ4P48050 445 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 ATXN1P54253 815 aaKnown RBP4.51□□□□□ -1.69
CHD8-212ENST00000557329 PRKAG1P54619 331 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 PRMT2P55345 433 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 PRKCZQ05513 592 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 SLC10A2Q12908 348 aaPredicted RBP4.51□□□□□ -1.69
CHD8-212ENST00000557329 MYO1EQ12965 1108 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 BOP1Q14137 746 aaKnown RBP4.51□□□□□ -1.69
CHD8-212ENST00000557329 CCDC142Q17RM4 750 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 KIAA0753Q2KHM9 967 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 VPS53Q5VIR6 699 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 COPS6Q7L5N1 327 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 MPP5Q8N3R9 675 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.51□□□□□ -1.69
CHD8-212ENST00000557329 ABHD11Q8NFV4 315 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 TTC8Q8TAM2 541 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 HASPINQ8TF76 798 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 BRI3BPQ8WY22 251 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 TRIM43Q96BQ3 446 aaPredicted RBP4.51□□□□□ -1.69
CHD8-212ENST00000557329 GDF15Q99988 308 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 OBP2AQ9NY56 170 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 SERTAD3Q9UJW9 196 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 NUP98P52948 1817 aa4.51□□□□□ -1.69
CHD8-212ENST00000557329 VSTM5A8MXK1 200 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 TCP10L2B9ZVM9 353 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 BTBD19C9JJ37 291 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 PYCARD-AS1I3L0S3 204 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 TPP1O14773 563 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 EBLN1P0CF75 366 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 CETPP11597 493 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 CD19P15391 556 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms