RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MKRN2Q9H000 416 aaKnown RBP16.6■□□□□ 0.25
TUBB3-213ENST00000557262 CD93Q9NPY3 652 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 FSCN3Q9NQT6 498 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 CNGB3Q9NQW8 809 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
TUBB3-213ENST00000557262 STOML2Q9UJZ1 356 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 CEP192Q8TEP8 1941 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 TSPAN3O60637 253 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 SYPP08247 313 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 LCP1P13796 627 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 ZNF445P59923 1031 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 FOXC1Q12948 553 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 ZNF234Q14588 700 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 CNGA2Q16280 664 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 CCDC40Q4G0X9 1142 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 WDR45BQ5MNZ6 344 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 TMEM270Q6UE05 265 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 PIP4P1Q86T03 277 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 RBBP8NLQ8NC74 664 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-213ENST00000557262 SLC35F5Q8WV83 523 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 TFAP2BQ92481 460 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 CIPCQ9C0C6 399 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
TUBB3-213ENST00000557262 SUSD2Q9UGT4 822 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 WASF3Q9UPY6 502 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 ASCC3Q8N3C0 2202 aaKnown RBP16.59■□□□□ 0.25
TUBB3-213ENST00000557262 FRYQ5TBA9 3013 aa16.59■□□□□ 0.25
TUBB3-213ENST00000557262 RNF225M0QZC1 329 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-213ENST00000557262 OPHN1O60890 802 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 LATS1O95835 1130 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 GNSP15586 552 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
TUBB3-213ENST00000557262 OXTRP30559 389 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 DAOAP59103 153 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 ARID5AQ03989 594 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 CETN1Q12798 172 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 ADGRF1Q5T601 910 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 TMEM215Q68D42 235 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 CADM4Q8NFZ8 388 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 LMO3Q8TAP4 145 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 IRGQQ8WZA9 623 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 PRCCQ92733 491 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-213ENST00000557262 SIPA1Q96FS4 1042 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 TOE1Q96GM8 510 aaKnown RBP16.58■□□□□ 0.24
TUBB3-213ENST00000557262 MAN1B1Q9UKM7 699 aa16.58■□□□□ 0.24
TUBB3-213ENST00000557262 USP24Q9UPU5 2620 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 P4HA2O15460 535 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 GABBR2O75899 941 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 EPHX1P07099 455 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 PROS1P07225 676 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 NCAM1P13591 858 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 MAOBP27338 520 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 HOXD9P28356 352 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-213ENST00000557262 TPMTP51580 245 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 STILQ15468 1287 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 PLEKHG6Q3KR16 790 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 PMF1Q6P1K2 205 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 SERPINA13PQ6UXR4 307 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 PPM1KQ8N3J5 372 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 MINDY1Q8N5J2 469 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 EHBP1Q8NDI1 1231 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 SORCS1Q8WY21 1168 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 DNASE2BQ8WZ79 361 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 GPR174Q9BXC1 333 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 DNAAF2Q9NVR5 837 aaKnown RBP16.57■□□□□ 0.24
TUBB3-213ENST00000557262 PLA2G4CQ9UP65 541 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 NFE2L3Q9Y4A8 694 aa16.57■□□□□ 0.24
TUBB3-213ENST00000557262 CEP295Q9C0D2 2601 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 PPP1R3GB7ZBB8 358 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 ACADMP11310 421 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 PRKCHP24723 683 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 HLA-FP30511 346 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 RGS7P49802 495 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 COPAP53621 1224 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 TTI2Q6NXR4 508 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 MSANTD2Q6P1R3 559 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 FOXR2Q6PJQ5 311 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 UNC45BQ8IWX7 931 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 WFIKKN2Q8TEU8 576 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 HSFY1Q96LI6 401 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 ZSWIM1Q9BR11 485 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-213ENST00000557262 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.56■□□□□ 0.24
TUBB3-213ENST00000557262 CFAP47Q6ZTR5 3102 aa16.56■□□□□ 0.24
TUBB3-213ENST00000557262 BICDL2A1A5D9 508 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 METTL12A8MUP2 240 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 MEI4A8MW99 385 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 PIK3R2O00459 728 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
TUBB3-213ENST00000557262 TOP3BO95985 862 aaKnown RBP16.55■□□□□ 0.24
TUBB3-213ENST00000557262 IGLV3-19P01714 112 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 LTFP02788 710 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 CD59P13987 128 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 SPINK2P20155 84 aa16.55■□□□□ 0.24
TUBB3-213ENST00000557262 BRD2P25440 801 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms