RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MYL4P12829 197 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 CD59P13987 128 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 GJA1P17302 382 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 ENGP17813 658 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 MCM5P33992 734 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 PI4KAP42356 2102 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 SEPHS1P49903 392 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 NPEPPSP55786 919 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 ROR1Q01973 937 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 SRSF1Q07955 248 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCFD1-223ENST00000557076 TEAD2Q15562 447 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 MAPK6Q16659 721 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 UPP1Q16831 310 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 CASC1Q6TDU7 716 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 LPCAT2Q7L5N7 544 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 MIER3Q7Z3K6 550 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 GLRX5Q86SX6 157 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 RASSF3Q86WH2 238 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 EXOC6Q8TAG9 804 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 TTC8Q8TAM2 541 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 BPIFB1Q8TDL5 484 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 EXOC4Q96A65 974 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 CPB2Q96IY4 423 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 CCDC136Q96JN2 1154 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 ZFYVE19Q96K21 471 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 CEP170P1Q96L14 293 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 TEKT3Q9BXF9 490 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 ZMYND12Q9H0C1 365 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 SLITRK6Q9H5Y7 841 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 PRORYQ9H606 182 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 GKN1Q9NS71 199 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 TMEM74BQ9NUR3 256 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 POLR3BQ9NW08 1133 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-223ENST00000557076 RBM28Q9NW13 759 aaKnown RBP5.16□□□□□ -1.58
SCFD1-223ENST00000557076 SMPD4Q9NXE4 827 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 RCAN3Q9UKA8 241 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 INSL5Q9Y5Q6 135 aa5.16□□□□□ -1.58
SCFD1-223ENST00000557076 KNL1Q8NG31 2342 aa5.15□□□□□ -1.58
SCFD1-223ENST00000557076 CYP3A7-CYP3A51PA0A087WV96 503 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 INO80B-WBP1J3KQ70 363 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 SYN3O14994 580 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 CHMP2AO43633 222 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 PRC1O43663 620 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 NPTXRO95502 500 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 FGF19O95750 216 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 EGFP01133 1207 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 NTRK1P04629 796 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 SERPINF2P08697 491 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 RXRAP19793 462 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 CYP3A7P24462 503 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 TKTP29401 623 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 GNA11P29992 359 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 QARSP47897 775 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 DHPSP49366 369 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 DGKEP52429 567 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 ATXN3P54252 364 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 PTH1RQ03431 593 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 MBTD1Q05BQ5 628 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 GFPT1Q06210 699 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 CYP4F3Q08477 520 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 TWF1Q12792 350 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 RUNX3Q13761 415 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 BYSLQ13895 437 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 TFDP1Q14186 410 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 DMC1Q14565 340 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 DUOXA1Q1HG43 343 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 Q4G0T1 1027 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 SYNE3Q6ZMZ3 975 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 TOGARAM2Q6ZUX3 1019 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 OTUD6AQ7L8S5 288 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 SGMS1Q86VZ5 419 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF761Q86XN6 746 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 TTC9BQ8N6N2 239 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 BEST2Q8NFU1 509 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 OLIG1Q8TAK6 271 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 ZBTB8AQ96BR9 441 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 MRRFQ96E11 262 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 CHFRQ96EP1 664 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 UROC1Q96N76 676 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 IL25Q9H293 177 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 CAPN10Q9HC96 672 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 FBRSL1Q9HCM7 1045 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 C6orf50Q9HD87 102 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 METTL5Q9NRN9 209 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 AFF4Q9UHB7 1163 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 FBXL5Q9UKA1 691 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 PILRBQ9UKJ0 227 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 TBX20Q9UMR3 447 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 PPT2Q9UMR5 302 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 APOBEC2Q9Y235 224 aaKnown RBP5.15□□□□□ -1.59
SCFD1-223ENST00000557076 INVSQ9Y283 1065 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 ASB3Q9Y575 518 aa5.15□□□□□ -1.59
SCFD1-223ENST00000557076 AHCTF1Q8WYP5 2266 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 ATG2BQ96BY7 2078 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 CREBBPQ92793 2442 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 CABIN1Q9Y6J0 2220 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 TRABD2BA6NFA1 517 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 SH3BP5O60239 455 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PPM1BO75688 479 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms