RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PCLAFQ15004 111 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 FAM160B1Q5W0V3 765 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 SLC9A4Q6AI14 798 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PMF1Q6P1K2 205 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CES3Q6UWW8 571 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 ILDR2Q71H61 639 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 DEFB107AQ8IZN7 70 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PHTF2Q8N3S3 785 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 AZIN2Q96A70 460 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 CEP41Q9BYV8 373 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 PDGFDQ9GZP0 370 aaPredicted RBP11.75□□□□□ -0.53
SRP54-213ENST00000556994 MIS12Q9H081 205 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 NRDE2Q9H7Z3 1164 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 HACL1Q9UJ83 578 aa11.75□□□□□ -0.53
SRP54-213ENST00000556994 ANK1P16157 1881 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 ZBTB42B2RXF5 422 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 ACKR2O00590 384 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 VDRP11473 427 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 CLCN3P51790 818 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 USP4Q13107 963 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MED21Q13503 144 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 CUL3Q13618 768 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MXD4Q14582 209 aaPredicted RBP11.74□□□□□ -0.53
SRP54-213ENST00000556994 PDK2Q15119 407 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 TRIP10Q15642 601 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 PDPK2PQ6A1A2 396 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 FRMD7Q6ZUT3 714 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MCUQ8NE86 351 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 AGR3Q8TD06 166 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 HPDLQ96IR7 371 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 SORT1Q99523 831 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 OXCT2Q9BYC2 517 aaPredicted RBP11.74□□□□□ -0.53
SRP54-213ENST00000556994 KLHL4Q9C0H6 718 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 RNPEPQ9H4A4 650 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 DHX35Q9H5Z1 703 aaKnown RBP11.74□□□□□ -0.53
SRP54-213ENST00000556994 XPNPEP3Q9NQH7 507 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 STK32BQ9NY57 414 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MOCS1Q9NZB8 636 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 CDH22Q9UJ99 828 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 LCTP09848 1927 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 DCXO43602 365 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 PLIN3O60664 434 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 KLHL2O95198 593 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 RAG1P15918 1043 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 L1CAMP32004 1257 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MAGEA6P43360 314 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 SERPINB9P50453 376 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 CDK18Q07002 472 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 AAGABQ6PD74 315 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MARK2Q7KZI7 788 aaKnown RBP11.74□□□□□ -0.53
SRP54-213ENST00000556994 APBB2Q92870 758 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 MOCOSQ96EN8 888 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 ATXN7L3BQ96GX2 97 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 CPB2Q96IY4 423 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 LPIN3Q9BQK8 851 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
SRP54-213ENST00000556994 ACSS2Q9NR19 701 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 FAM49BQ9NUQ9 324 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 TMEM216Q9P0N5 145 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 POMPQ9Y244 141 aa11.74□□□□□ -0.53
SRP54-213ENST00000556994 A6NJR5 290 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 CCNT2O60583 730 aaKnown RBP11.73□□□□□ -0.53
SRP54-213ENST00000556994 OR6B1O95007 311 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 ARIH2O95376 493 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 PRKCGP05129 697 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 SPATA31D3P0C874 917 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 UQCRBP14927 111 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 VCLP18206 1134 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 ITGAXP20702 1163 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 SDC4P31431 198 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 HDAC4P56524 1084 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 ITGA9Q13797 1035 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 HNRNPDQ14103 355 aaKnown RBP11.73□□□□□ -0.53
SRP54-213ENST00000556994 GOLGA7BQ2TAP0 167 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 PPP1R26Q5T8A7 1209 aaPredicted RBP11.73□□□□□ -0.53
SRP54-213ENST00000556994 PACS1Q6VY07 963 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 TIFABQ6ZNK6 161 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 SPATA31D4Q6ZUB0 917 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 ACAD11Q709F0 780 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 ST13P4Q8IZP2 240 aaPredicted RBP11.73□□□□□ -0.53
SRP54-213ENST00000556994 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 CXorf38Q8TB03 319 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 TFB1MQ8WVM0 346 aaKnown RBP11.73□□□□□ -0.53
SRP54-213ENST00000556994 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.539e-8■□□□□ 9.3
SRP54-213ENST00000556994 CENPKQ9BS16 269 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 FZD8Q9H461 694 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 AS3MTQ9HBK9 375 aa11.73□□□□□ -0.53
SRP54-213ENST00000556994 E9PBE3 544 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms