RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NAB2Q15742 525 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 SNRNP35Q16560 246 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 SLC18A3Q16572 532 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 LY6KQ17RY6 165 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 MTERF2Q49AM1 385 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 TDRD12Q587J7 1177 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 ZNF484Q5JVG2 852 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PAPD7Q5XG87 772 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 IQSEC1Q6DN90 963 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 DPY19L2P1Q6NXN4 242 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 DPP9Q86TI2 863 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PTRH1Q86Y79 214 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 MSL3Q8N5Y2 521 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 ATP8B4Q8TF62 1192 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PRPF31Q8WWY3 499 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 BRI3BPQ8WY22 251 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 POMGNT1Q8WZA1 660 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 SECISBP2LQ93073 1101 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 BICD1Q96G01 975 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 ABHD8Q96I13 439 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 RPGRIP1Q96KN7 1286 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 ALS2CR12Q96Q35 445 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PARK7Q99497 189 aaKnown RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.78□□□□□ -1.64
SRP54-212ENST00000556992 SH2D3AQ9BRG2 576 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 POLR3FQ9H1D9 316 aaPredicted RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 GANQ9H2C0 597 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 PCIF1Q9H4Z3 704 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 UBE2TQ9NPD8 197 aaPredicted RBP4.78□□□□□ -1.64
SRP54-212ENST00000556992 XPNPEP1Q9NQW7 623 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 GCNT4Q9P109 453 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 DNAJC12Q9UKB3 198 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 INTUQ9ULD6 942 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 NUB1Q9Y5A7 615 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 MRFAP1Q9Y605 127 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 SAR1BQ9Y6B6 198 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 STYXL1Q9Y6J8 313 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 KIF13BQ9NQT8 1826 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 ZMYM2Q9UBW7 1377 aa4.78□□□□□ -1.64
SRP54-212ENST00000556992 CUL9Q8IWT3 2517 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 A0A0B4J269 797 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CTAGE15A4D2H0 777 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 SLC15A5A6NIM6 579 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 HNRNPDLO14979 420 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 MAGEB2O15479 319 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ADCY3O60266 1144 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 HBP1O60381 514 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ZC3H11AO75152 810 aaKnown RBP eCLIP4.77□□□□□ -1.65
SRP54-212ENST00000556992 CELF2O95319 508 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 GH1P01241 217 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PIGRP01833 764 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PLEKP08567 350 aaPredicted RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 HOXC6P09630 235 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CTAGE8P0CG41 777 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PABPC1P11940 636 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 GLRA2P23416 452 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ADORA2AP29274 412 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ADSSP30520 456 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 GCLMP48507 274 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 LIG4P49917 911 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 JAM2P57087 298 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 BPIFB4P59827 614 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CDC42EP1Q00587 391 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 MYL7Q01449 175 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 GFPT1Q06210 699 aaPredicted RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 POU5F1BQ06416 359 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PPP3CAQ08209 521 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 BMS1Q14692 1282 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 DRAP1Q14919 205 aaPredicted RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 KIAA0753Q2KHM9 967 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 KRT39Q6A163 491 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PCSK4Q6UW60 755 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ARHGAP36Q6ZRI8 547 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 USP30Q70CQ3 517 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ENOSF1Q7L5Y1 443 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 OTOP2Q7RTS6 562 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 SRGAP1Q7Z6B7 1085 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CTAGE6Q86UF2 777 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ZBTB8OSQ8IWT0 167 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CTAGE4Q8IX94 777 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 GPD1LQ8N335 351 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 SLC35F6Q8N357 371 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ANKRD13CQ8N6S4 541 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 LMO3Q8TAP4 145 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.77□□□□□ -1.65
SRP54-212ENST00000556992 PARD3BQ8TEW8 1205 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PSPC1Q8WXF1 523 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 ANKRD7Q92527 254 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 RABGGTAQ92696 567 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 TMEM143Q96AN5 459 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CCDC127Q96BQ5 260 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 PCYT2Q99447 389 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CBWD1Q9BRT8 395 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 FAM213AQ9BRX8 229 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 CARD6Q9BX69 1037 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 C2orf40Q9H1Z8 148 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 EPN3Q9H201 632 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms