RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 NSMCE1Q8WV22 266 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 C1orf54Q8WWF1 131 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 FATE1Q969F0 183 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SLC10A4Q96EP9 437 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CPB2Q96IY4 423 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TSGA13Q96PP4 275 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 NUDT16L1Q9BRJ7 211 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 KATNAL1Q9BW62 490 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 VTA1Q9NP79 307 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ZFATQ9P243 1243 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 HESX1Q9UBX0 185 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 PNMA3Q9UL41 463 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 PCDHGC3Q9UN70 934 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF638Q14966 1978 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CCL15-CCL14A0A0B4J2E2 113 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 LACTBL1A8MY62 500 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 PODXLO00592 558 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 PSTPIP1O43586 416 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 GMNNO75496 209 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 OR5F1O95221 314 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 PRLP01236 227 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 GH1P01241 217 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 GSTT2P0CG29 244 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 GSTT2BP0CG30 244 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SMPD1P17405 629 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 RFC1P35251 1148 aaPredicted RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CDH8P55286 799 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 TFDP1Q14186 410 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 GRB14Q14449 540 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CCL15Q16663 113 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SLC10A6Q3KNW5 377 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ATP13A4Q4VNC1 1196 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 JADE1Q6IE81 842 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 RHBDF2Q6PJF5 856 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 GPR142Q7Z601 462 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF467Q7Z7K2 595 aaPredicted RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 KATNAL2Q8IYT4 538 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 UBLCP1Q8WVY7 318 aaPredicted RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 IRGQQ8WZA9 623 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ART4Q93070 314 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 BARD1Q99728 777 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF408Q9H9D4 720 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 CLK4Q9HAZ1 481 aaKnown RBP5.26□□□□□ -1.57
TMEM260-210ENST00000556422 SLC12A6Q9UHW9 1150 aa5.26□□□□□ -1.57
TMEM260-210ENST00000556422 FAM221BA6H8Z2 402 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 F8VP50 259 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 EIF3HO15372 352 aaKnown RBP eCLIP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 TSPAN6O43657 245 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 STRNO43815 780 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 LSM8O95777 96 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GNRH1P01148 92 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NUDT17P0C025 328 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 STAG3L1P0CL83 205 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 RALAP11233 206 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GFAPP14136 432 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NR1D1P20393 614 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 ATP1A2P50993 1020 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 RAD23BP54727 409 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 B2MP61769 119 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PDCLQ13371 301 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SURF1Q15526 300 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PTPN20Q4JDL3 420 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SGO2Q562F6 1265 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF484Q5JVG2 852 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC105Q8IYK2 499 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 ARFGAP1Q8N6T3 406 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SCAIQ8N9R8 606 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 FEZF2Q8TBJ5 459 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 TTC17Q96AE7 1141 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 MCEEQ96PE7 176 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 HAUS8Q9BT25 410 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PLVAPQ9BX97 442 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 DCLK3Q9C098 648 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PABPC3Q9H361 631 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SMYD3Q9H7B4 428 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 MRPL47Q9HD33 250 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PARVAQ9NVD7 372 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PRMT7Q9NVM4 692 aaPredicted RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 KLHL11Q9NVR0 708 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 BPTFQ12830 3046 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 H3BRB1 525 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 HAT1O14929 419 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 ITGB3P05106 788 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 MMP3P08254 477 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CETPP11597 493 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 WEE1P30291 646 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 IDUAP35475 653 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SERPINB8P50452 374 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 C21orf58P58505 322 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GUCY1A3Q02108 690 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 KRT17Q04695 432 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 ORC1Q13415 861 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 MTMR3Q13615 1198 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CYP4A22Q5TCH4 519 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM214Q6NUQ4 689 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 DENND1BQ6P3S1 775 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 KDELC1Q6UW63 502 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 STX12Q86Y82 276 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 RHOT1Q8IXI2 618 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms