RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 LPPQ93052 612 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 GJA10Q969M2 543 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ARL8AQ96BM9 186 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF503Q96F45 646 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 RNPC3Q96LT9 517 aaKnown RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CCDC114Q96M63 670 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SELENOSQ9BQE4 189 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 REEP2Q9BRK0 252 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TACO1Q9BSH4 297 aaKnown RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 PAGR1Q9BTK6 254 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 POLR3CQ9BUI4 534 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TEKT3Q9BXF9 490 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 WDR11Q9BZH6 1224 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 KCTD10Q9H3F6 313 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 RABEP2Q9H5N1 569 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 KANSL2Q9H9L4 492 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 PARVGQ9HBI0 331 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TMBIM4Q9HC24 238 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 KCNMB3Q9NPA1 279 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 OLFML3Q9NRN5 406 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 KCND2Q9NZV8 630 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SAMD15Q9P1V8 674 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SIRPGQ9P1W8 387 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 NYAP2Q9P242 653 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ARHGAP28Q9P2N2 729 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 OAZ3Q9UMX2 235 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 PACSIN2Q9UNF0 486 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ASTN1O14525 1302 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TRBV23-1A0A0A0MS06 115 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 GMNCA6NCL1 334 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 CCDC169A6NNP5 214 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 F8VZ95 297 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 K7ENM7 598 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 RGS16O15492 202 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 CHMP2AO43633 222 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ADCY3O60266 1144 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 TLR2O60603 784 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 EXOC3O60645 756 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 GAS7O60861 476 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 STK10O94804 968 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 NOL4O94818 638 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 FSBPO95073 299 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 AMHP03971 560 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 SLPIP03973 132 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ACTN1P12814 892 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ABCB4P21439 1286 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 PON1P27169 355 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 AOAHP28039 575 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 MAN1A1P33908 653 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 SHMT1P34896 483 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 HSD17B3P37058 310 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 STAT3P40763 770 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 SLC12A3P55017 1021 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 RNASE9P60153 205 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 IRX3P78415 501 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 MRPS25P82663 173 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 GUCY1A3Q02108 690 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 SP3Q02447 781 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ADCY2Q08462 1091 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 CALCOCO2Q13137 446 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 DUSP8Q13202 625 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 GIT2Q14161 759 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 NFIL3Q16649 462 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ABCB5Q2M3G0 1257 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 SPDYAQ5MJ70 313 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 LRCH2Q5VUJ6 765 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 TRIM68Q6AZZ1 485 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 C11orf63Q6NUN7 778 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 RNF207Q6ZRF8 634 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF571Q7Z3V5 609 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 CPLX4Q7Z7G2 160 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 USP37Q86T82 979 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 MTDHQ86UE4 582 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 PALM2Q8IXS6 379 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 PCDH19Q8TAB3 1148 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ETNPPLQ8TBG4 499 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 MORC4Q8TE76 937 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 MAIP1Q8WWC4 291 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 MBOAT7Q96N66 472 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 IWS1Q96ST2 819 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 GDF15Q99988 308 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 EIF2AK1Q9BQI3 630 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 AP1M1Q9BXS5 423 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 PACSIN1Q9BY11 444 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 FAM129AQ9BZQ8 928 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 INTS2Q9H0H0 1204 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 DDX47Q9H0S4 455 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 CARD9Q9H257 536 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 BHMT2Q9H2M3 363 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 DPH5Q9H2P9 285 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF703Q9H7S9 590 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 TMEM206Q9H813 350 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 VCPKMTQ9H867 229 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 YY1AP1Q9H869 796 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 PPANQ9NQ55 473 aaKnown RBP4.67□□□□□ -1.66
ATXN3-241ENST00000556374 PI4KBQ9UBF8 816 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 ODF2LQ9ULJ1 636 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 SYNPO2Q9UMS6 1093 aa4.67□□□□□ -1.66
ATXN3-241ENST00000556374 FRMPD4Q14CM0 1322 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms